Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MIR548K-201ENST00000408406 116 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AC004386.2-201ENST00000441858 148 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AL353572.1-201ENST00000442490 417 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.65□□□□□ -2.15
HPS4Q9NQG7 OR2AQ1P-201ENST00000451972 200 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AC087477.1-201ENST00000465747 340 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 MTND4P17-201ENST00000470444 350 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AC010409.1-201ENST00000487382 476 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.65□□□□□ -2.15
HPS4Q9NQG7 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AC026470.2-201ENST00000561492 181 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 MIR5006-201ENST00000583027 110 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AC019193.3-201ENST00000609144 554 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 TCL6_2.1-201ENST00000615162 119 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 MIR6128-201ENST00000615528 109 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AC022306.2-201ENST00000617563 647 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 AL159152.1-201ENST00000635019 2587 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 SNORD50.1-201ENST00000362987 71 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 Y_RNA.339-201ENST00000365325 102 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 MIR300-201ENST00000401138 83 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 NCOR1P3-201ENST00000420479 303 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 RPS3AP52-201ENST00000435639 297 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AC079354.2-201ENST00000453523 154 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AC007215.1-201ENST00000464893 276 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 FO393415.2-201ENST00000480085 343 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 RPL23AP75-201ENST00000491601 451 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AC046134.1-201ENST00000514454 666 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 SUMO2P18-201ENST00000518873 252 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.64□□□□□ -2.15
HPS4Q9NQG7 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 MIR5094-201ENST00000578766 85 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AC005730.3-201ENST00000583067 366 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 POLR3GP2-201ENST00000588366 668 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AC124303.1-201ENST00000605703 360 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.64□□□□□ -2.15
HPS4Q9NQG7 uc_338.5-201ENST00000611839 155 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AC083806.3-201ENST00000614016 455 ntBASIC1.64□□□□□ -2.15
HPS4Q9NQG7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.64□□□□□ -2.15
HPS4Q9NQG7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 SNORA72.1-201ENST00000363485 129 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 Y_RNA.166-201ENST00000363730 102 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 RNU6-338P-201ENST00000383888 105 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 RNU6-418P-201ENST00000384035 107 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 RNY3P14-201ENST00000384309 102 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 MIR1283-1-201ENST00000408494 87 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 RNU4-14P-201ENST00000410858 122 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AL139396.1-201ENST00000421137 167 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 USP9YP30-201ENST00000430729 455 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AC098614.3-201ENST00000438957 440 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 DAP3P1-201ENST00000441522 278 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AL357134.1-201ENST00000445848 426 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AL355073.2-201ENST00000612106 557 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.63□□□□□ -2.15
HPS4Q9NQG7 MIR8070-201ENST00000616510 88 ntBASIC1.63□□□□□ -2.15
HPS4Q9NQG7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HPS4Q9NQG7 Y_RNA.88-201ENST00000363029 99 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 RNY1P10-201ENST00000363268 113 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 RNU6-842P-201ENST00000384269 107 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 MIR487A-201ENST00000385009 80 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 MIR1287-201ENST00000408492 90 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 MTCO3P8-201ENST00000453691 755 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AC067942.3-201ENST00000512025 362 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 SNORA31.17-201ENST00000516953 127 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AL121579.1-201ENST00000555129 305 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AC005668.1-201ENST00000571142 476 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AP001094.1-201ENST00000579805 193 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 MIR548S-201ENST00000581352 82 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.62□□□□□ -2.15
HPS4Q9NQG7 AC137590.2-201ENST00000619709 240 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 TPTEP1-208ENST00000636884 213 ntBASIC1.62□□□□□ -2.15
HPS4Q9NQG7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.62□□□□□ -2.15
HPS4Q9NQG7 MIR337-201ENST00000362281 93 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 RNU6-112P-201ENST00000363599 104 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 RNU6-174P-201ENST00000410406 106 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC004866.1-201ENST00000411748 78 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC099677.2-201ENST00000436385 175 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC092473.1-201ENST00000441098 221 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC091951.2-201ENST00000500762 203 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC026782.1-201ENST00000512952 449 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 RNU6-507P-201ENST00000516045 100 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms