Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 U8.21-201ENST00000459536 136 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 AL157392.4-201ENST00000609756 345 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 SNORA33-201ENST00000363664 130 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 SNORA20.2-201ENST00000383922 131 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 MIR1185-1-201ENST00000408598 86 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 SNORA70.12-201ENST00000516084 153 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 AC022616.3-201ENST00000523940 148 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 AL133173.2-201ENST00000614270 90 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 MIR6516-201ENST00000630554 81 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 SEPT14P19-203ENST00000633205 211 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-501P-201ENST00000364072 100 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-1317P-201ENST00000364582 104 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-245P-201ENST00000384020 107 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-45P-201ENST00000384471 107 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 MIR586-201ENST00000385035 97 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 SNORA16.2-201ENST00000390991 127 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-221P-201ENST00000459541 99 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 Y_RNA.672-201ENST00000516289 104 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 DEFB131C-201ENST00000528817 165 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 AC007014.2-201ENST00000615581 479 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 U6.108-201ENST00000637764 58 ntBASIC0.17□□□□□ -2.38
KIAA1549Q9HCM3 RNU4-68P-201ENST00000364314 141 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 SNORD73A-201ENST00000386062 65 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 Y_RNA.608-201ENST00000410647 95 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 AL365184.2-201ENST00000431139 435 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 AC079781.2-201ENST00000446424 169 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 AC091435.1-201ENST00000505442 584 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 LRRC34P2-201ENST00000514850 553 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-917P-201ENST00000516294 104 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 Vault.3-201ENST00000516676 95 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 RNA5SP454-201ENST00000517231 127 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 AC104010.1-201ENST00000616889 150 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 MIR6759-201ENST00000638110 65 ntBASIC0.16□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-1305P-201ENST00000364353 104 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 SNORA36A-201ENST00000384221 132 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 MIR32-201ENST00000384965 70 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 AL034345.1-201ENST00000407768 123 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 Y_RNA.598-201ENST00000410480 95 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 RPS29P15-201ENST00000458329 171 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 FGF7P1-201ENST00000582820 288 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 7SK.7-201ENST00000603504 247 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 AC006927.3-201ENST00000638789 384 ntBASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.15□□□□□ -2.38
KIAA1549Q9HCM3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-931P-201ENST00000363850 107 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-424P-201ENST00000384367 105 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 MIR320B2-201ENST00000408479 138 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 RNU4-46P-201ENST00000410818 138 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AC004866.1-201ENST00000411748 78 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 RNU7-182P-201ENST00000459009 62 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AC010493.1-201ENST00000513479 292 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 MTND4LP26-201ENST00000518144 282 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AL162730.1-201ENST00000605734 292 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AC002044.1-201ENST00000606707 158 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AC004832.4-201ENST00000608952 331 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 AC022418.1-201ENST00000624118 445 ntBASIC0.15□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-1286P-201ENST00000383871 107 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MIR454-201ENST00000390180 115 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MRPL42P3-201ENST00000401492 326 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MTCO2P18-201ENST00000457151 658 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 snoU13.25-201ENST00000458945 104 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AF186996.7-201ENST00000492781 209 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AC105417.1-201ENST00000514691 285 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 RNU4-77P-201ENST00000516692 156 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MIR4999-201ENST00000585029 91 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AL121992.2-201ENST00000606262 256 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AC137590.2-201ENST00000619709 240 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MIR103A1-201ENST00000362165 78 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 SNORD115-7-201ENST00000365306 82 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 SNORD70.1-201ENST00000391007 85 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms