Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU6-559P-201ENST00000516151 98 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 RNU6-567P-201ENST00000516746 107 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 RNA5SP137-201ENST00000516833 135 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 RNA5SP490-201ENST00000517141 136 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.47□□□□□ -2.17
NANOGQ9H9S0 MIR4769-201ENST00000584126 77 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.47□□□□□ -2.17
NANOGQ9H9S0 SNRPGP17-201ENST00000603780 214 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 AL773524.1-201ENST00000614065 229 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.47□□□□□ -2.17
NANOGQ9H9S0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NANOGQ9H9S0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AC006026.1-201ENST00000444025 1803 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 RNU6-593P-201ENST00000364716 112 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.356-201ENST00000365475 113 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 RNU6-890P-201ENST00000384121 107 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
NANOGQ9H9S0 MIR764-201ENST00000390811 85 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 MTND4LP11-201ENST00000422184 280 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.46□□□□□ -2.18
NANOGQ9H9S0 MTND3P23-201ENST00000431980 347 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.46□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.635-201ENST00000459041 101 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.632-201ENST00000459189 102 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AP000870.1-201ENST00000472927 406 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 FGF7P4-201ENST00000509595 295 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.46□□□□□ -2.18
NANOGQ9H9S0 RNU6-237P-201ENST00000515985 71 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AC113139.1-201ENST00000605049 239 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.46□□□□□ -2.18
NANOGQ9H9S0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.46□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.804-201ENST00000615262 101 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AL590240.4-201ENST00000616908 390 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 AC005562.2-201ENST00000618264 111 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 MIR1302-1-201ENST00000637932 143 ntBASIC1.46□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.67-201ENST00000362870 100 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 RNY1P16-201ENST00000363063 111 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.106-201ENST00000363189 100 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 RNU6-873P-201ENST00000363833 107 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 SNORD115-32-201ENST00000364079 82 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.263-201ENST00000364659 114 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 SNORD14D-201ENST00000384390 87 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 MIR10B-201ENST00000385011 110 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 RNA5SP450-201ENST00000411206 102 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 SRIP3-201ENST00000413200 219 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.45□□□□□ -2.18
NANOGQ9H9S0 AC139712.2-201ENST00000424302 339 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 MTCO1P44-201ENST00000441935 243 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 HMGN2P23-201ENST00000456759 269 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 AC010531.2-201ENST00000465012 153 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 RNU5F-4P-201ENST00000516581 114 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 AL590705.4-201ENST00000532209 134 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.45□□□□□ -2.18
NANOGQ9H9S0 RAB11AP2-201ENST00000545905 639 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 HSBP1P1-201ENST00000555205 166 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 MIR3169-201ENST00000578032 83 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 MIR5006-201ENST00000583027 110 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 LARP7P1-201ENST00000605576 316 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.45□□□□□ -2.18
NANOGQ9H9S0 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
NANOGQ9H9S0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NANOGQ9H9S0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
NANOGQ9H9S0 SNORD115-8-201ENST00000363856 82 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RNA5SP493-201ENST00000364115 91 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RNY3P11-201ENST00000364153 102 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RNU6-99P-201ENST00000364721 107 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 SNORD87-201ENST00000364849 89 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 SNORD115-38-201ENST00000365037 82 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.319-201ENST00000365138 92 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RNU6-418P-201ENST00000384035 107 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RNU6-1009P-201ENST00000390996 107 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RNU6-159P-201ENST00000391080 106 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AL627390.1-201ENST00000396055 340 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RN7SKP51-201ENST00000410781 304 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AF228730.4-201ENST00000421457 183 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 MRPS18CP6-201ENST00000423587 223 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 USMG5P1-201ENST00000425964 177 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AC016717.1-201ENST00000448918 286 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AC016925.1-201ENST00000458303 298 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AC097473.1-201ENST00000508142 408 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 Y_RNA.718-201ENST00000517110 102 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AP005660.1-201ENST00000522972 293 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AC087441.2-201ENST00000529141 262 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RRN3P3-201ENST00000549207 578 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.44□□□□□ -2.18
NANOGQ9H9S0 RMST_6.1-201ENST00000611980 203 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 MIR1244-1-201ENST00000612829 85 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 AC137590.2-201ENST00000619709 240 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 MIR1244-3-201ENST00000635744 85 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 MIR1244-2-201ENST00000636449 85 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 MIR1244-4-202ENST00000636813 85 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 BX322639.1-202ENST00000423987 2213 ntBASIC1.44□□□□□ -2.18
NANOGQ9H9S0 MTND5P16-201ENST00000460269 1703 ntBASIC1.43□□□□□ -2.18
NANOGQ9H9S0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms