Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RPS27AP9-201ENST00000477681 438 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 AC100767.1-201ENST00000528178 123 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 RNU4-15P-201ENST00000362613 141 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 Y_RNA.329-201ENST00000365209 107 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 RPS3P1-201ENST00000456781 192 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 AL441985.1-201ENST00000457727 251 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 AC091179.1-201ENST00000461606 579 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 RPL23AP70-201ENST00000483361 460 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 AC136628.3-201ENST00000521868 290 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 MIR3162-201ENST00000581818 82 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 AL391813.1-201ENST00000603098 260 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 SNORD11B-201ENST00000607707 90 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 AC005562.2-201ENST00000618264 111 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 AC068205.3-201ENST00000636385 468 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 AC091152.2-201ENST00000591628 2569 ntBASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BCAS3Q9H6U6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 SNORD115-30-201ENST00000364117 82 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 Y_RNA.243-201ENST00000364481 109 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 SNORD50B-201ENST00000364995 70 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 RNU6-1130P-201ENST00000365434 107 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 RNU6-449P-201ENST00000383914 107 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 Y_RNA.412-201ENST00000384001 104 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 Y_RNA.568-201ENST00000384742 113 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 RNU6-750P-201ENST00000390946 107 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 RPL21P3-201ENST00000395517 478 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 AL139095.1-201ENST00000404326 391 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 RNA5SP504-201ENST00000410676 117 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 AC146507.2-201ENST00000460608 476 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 RNU7-121P-201ENST00000516604 62 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 AC027176.1-201ENST00000560204 514 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 AC002076.2-201ENST00000617362 122 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 GABRG2-229ENST00000641017 3628 ntBASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BCAS3Q9H6U6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 AC010889.1-201ENST00000566193 2666 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 SNORD114-19-201ENST00000363072 75 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 U3.9-201ENST00000363823 204 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 RNU6-801P-201ENST00000364087 105 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 RNU1-112P-201ENST00000364401 164 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 RNU6-275P-201ENST00000364910 107 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 SNORD116-18-201ENST00000383961 92 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 Y_RNA.415-201ENST00000384012 112 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 SNORA67.2-201ENST00000384300 149 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 RNU6-381P-201ENST00000391259 108 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 AC004866.1-201ENST00000411748 78 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 TOMM22P2-201ENST00000430735 237 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 AC010099.1-201ENST00000455434 375 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 AC083906.5-201ENST00000503722 328 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 RNU6-479P-201ENST00000516348 105 ntBASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
BCAS3Q9H6U6 RNU6-727P-201ENST00000363592 107 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 Y_RNA.343-201ENST00000365354 112 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 RNU6-959P-201ENST00000384671 107 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 RNU6-763P-201ENST00000390865 106 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 RNU6-710P-201ENST00000410424 105 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 AL162725.1-201ENST00000435405 301 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 AC105272.1-201ENST00000438604 198 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 SNRPGP3-201ENST00000469405 227 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 MIR4319-201ENST00000577285 85 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 MIR5688-201ENST00000580619 83 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 RPL17P51-201ENST00000605218 238 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 AC008873.1-201ENST00000625051 138 ntBASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BCAS3Q9H6U6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
BCAS3Q9H6U6 RNU6-1210P-201ENST00000363775 107 ntBASIC3.23□□□□□ -1.89
BCAS3Q9H6U6 RNU6-198P-201ENST00000384258 104 ntBASIC3.23□□□□□ -1.89
BCAS3Q9H6U6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
BCAS3Q9H6U6 AL133475.1-201ENST00000404414 305 ntBASIC3.23□□□□□ -1.89
BCAS3Q9H6U6 AL355497.1-201ENST00000406262 551 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms