Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MIR518A2-201ENST00000384966 87 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 MIR1262-201ENST00000408276 93 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 RNA5SP489-201ENST00000410986 109 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.26□□□□□ -2.05
USP44Q9H0E7 AC004386.2-201ENST00000441858 148 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 snoU13.23-201ENST00000458863 104 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 MIR2053-201ENST00000459295 91 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.26□□□□□ -2.05
USP44Q9H0E7 RNU6-991P-201ENST00000516168 107 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 RNU2-19P-201ENST00000517288 84 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 AC027288.2-201ENST00000553028 243 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 ANP32BP3-201ENST00000559213 706 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 SUB1P3-201ENST00000564581 315 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.26□□□□□ -2.05
USP44Q9H0E7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.26□□□□□ -2.05
USP44Q9H0E7 AC012640.5-201ENST00000623897 319 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.26□□□□□ -2.05
USP44Q9H0E7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
USP44Q9H0E7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
USP44Q9H0E7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP44Q9H0E7 Y_RNA.146-201ENST00000363549 102 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 RNU6-159P-201ENST00000391080 106 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 MTND2P29-201ENST00000438595 412 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 UBE2V1P7-201ENST00000446395 340 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 RPL23AP42-201ENST00000471152 471 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 AC027575.1-201ENST00000481064 460 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.25□□□□□ -2.05
USP44Q9H0E7 RNU6-264P-201ENST00000517134 104 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 CYCSP23-201ENST00000519781 313 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 DEFB131C-201ENST00000528817 165 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 DEFB122-202ENST00000569013 197 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 AC007229.1-201ENST00000590455 412 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 AC080078.3-201ENST00000605407 463 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 AC130454.1-201ENST00000622948 401 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
USP44Q9H0E7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP44Q9H0E7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USP44Q9H0E7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
USP44Q9H0E7 RNU1-58P-201ENST00000362413 163 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 Y_RNA.394-201ENST00000383942 103 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR586-201ENST00000385035 97 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR190B-201ENST00000401119 79 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR1283-1-201ENST00000408494 87 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.24□□□□□ -2.05
USP44Q9H0E7 AC007098.1-201ENST00000420122 367 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MRPS18CP6-201ENST00000423587 223 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.24□□□□□ -2.05
USP44Q9H0E7 HMGN2P23-201ENST00000456759 269 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.24□□□□□ -2.05
USP44Q9H0E7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.24□□□□□ -2.05
USP44Q9H0E7 AC004584.2-201ENST00000570407 410 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR4524B-201ENST00000581569 115 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR4753-201ENST00000585119 83 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR1244-1-201ENST00000612829 85 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 U1.36-201ENST00000620684 176 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR1244-3-201ENST00000635744 85 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR1244-2-201ENST00000636449 85 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 MIR1244-4-202ENST00000636813 85 ntBASIC2.24□□□□□ -2.05
USP44Q9H0E7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USP44Q9H0E7 ZNF204P-201ENST00000416749 2397 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 MTND4P1-201ENST00000457501 1466 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 RNU6-1115P-201ENST00000362490 106 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 Y_RNA.431-201ENST00000384086 102 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 Y_RNA.460-201ENST00000384255 102 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 RNU1-139P-201ENST00000391307 165 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AL355497.1-201ENST00000406262 551 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AC092423.1-201ENST00000430165 186 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AL357134.1-201ENST00000445848 426 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AP000870.1-201ENST00000472927 406 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 HMGN1P13-201ENST00000505795 138 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 ATP5EP1-201ENST00000510257 156 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.23□□□□□ -2.05
USP44Q9H0E7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 RNU6-250P-201ENST00000516958 103 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 RNU6-699P-201ENST00000517081 110 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 MIR2355-201ENST00000517199 87 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AC091144.1-201ENST00000519573 138 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.23□□□□□ -2.05
USP44Q9H0E7 MIR4419B-201ENST00000577260 68 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 CYP2C61P-201ENST00000604072 290 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AL160413.1-201ENST00000622780 310 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AC090574.1-201ENST00000623186 233 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
USP44Q9H0E7 LINC02555-201ENST00000563933 1951 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 AC073544.1-201ENST00000600110 1595 ntBASIC2.23□□□□□ -2.05
USP44Q9H0E7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP44Q9H0E7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
USP44Q9H0E7 RNU6-222P-201ENST00000362438 107 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 RNU6-490P-201ENST00000362985 107 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AL033519.2-201ENST00000403958 392 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AL445305.1-201ENST00000432577 575 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms