Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RPS3P1-201ENST00000456781 192 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 CYCTP-201ENST00000504253 315 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-966P-201ENST00000516479 104 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-344P-201ENST00000516635 111 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-928P-201ENST00000516876 104 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-844P-201ENST00000517175 102 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 MIR4524B-201ENST00000581569 115 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 DEFB117-201ENST00000602356 141 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 AC092435.3-201ENST00000565538 3654 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CNTNAP4Q9C0A0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.65□□□□□ -1.82
CNTNAP4Q9C0A0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.65□□□□□ -1.82
CNTNAP4Q9C0A0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CNTNAP4Q9C0A0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-103P-201ENST00000363686 107 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 SNORA20-201ENST00000384662 132 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-376P-201ENST00000384731 106 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-239P-201ENST00000390990 99 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RPS15AP5-201ENST00000436276 388 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RPS20P10-201ENST00000451209 253 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 Y_RNA.637-201ENST00000459424 114 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 AC107626.1-201ENST00000471084 183 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RPS29P20-201ENST00000489592 171 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RNA5SP217-201ENST00000515959 91 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-436P-201ENST00000516171 114 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 Y_RNA.676-201ENST00000516393 96 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 RNU2-12P-201ENST00000517216 168 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 AC136628.3-201ENST00000521868 290 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 DEFB131C-201ENST00000528817 165 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 MIR548X2-201ENST00000579776 100 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 MIR3613-201ENST00000579844 87 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 MIR3145-201ENST00000580727 82 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 AC073308.1-201ENST00000623696 305 ntBASIC3.65□□□□□ -1.83
CNTNAP4Q9C0A0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-275P-201ENST00000364910 107 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 Y_RNA.329-201ENST00000365209 107 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 MIR196B-201ENST00000384852 84 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 CBX3P9-201ENST00000402326 552 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 U3.40-201ENST00000408706 208 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 snoU13.14-201ENST00000459372 104 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RNU1-41P-201ENST00000516161 162 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RNU1-48P-201ENST00000516400 162 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 MIR5688-201ENST00000580619 83 ntBASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.64□□□□□ -1.83
CNTNAP4Q9C0A0 AP003122.5-201ENST00000527668 3766 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 Y_RNA.182-201ENST00000363880 111 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 RNU2-2P-201ENST00000410396 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 RNA5SP21-201ENST00000410917 96 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 AC245291.1-201ENST00000419501 328 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 AL513328.1-201ENST00000446460 224 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 UBL5P3-201ENST00000475112 231 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 AC006445.2-201ENST00000510061 472 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 RN7SKP164-201ENST00000516138 266 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 RNU7-121P-201ENST00000516604 62 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 RNU2-4P-201ENST00000606190 192 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.15-201ENST00000611544 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.16-201ENST00000613119 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.12-201ENST00000613778 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.9-201ENST00000615427 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.11-201ENST00000616345 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.2-201ENST00000616535 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.3-201ENST00000617785 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.19-201ENST00000618602 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 RNU2-1-201ENST00000618664 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.6-201ENST00000619225 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.5-201ENST00000619465 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 U2.10-201ENST00000620268 191 ntBASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CNTNAP4Q9C0A0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTNAP4Q9C0A0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTNAP4Q9C0A0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CNTNAP4Q9C0A0 RNU1-112P-201ENST00000364401 164 ntBASIC3.62□□□□□ -1.83
CNTNAP4Q9C0A0 SNORA67.4-201ENST00000384688 142 ntBASIC3.62□□□□□ -1.83
CNTNAP4Q9C0A0 RNU6-19P-201ENST00000384718 107 ntBASIC3.62□□□□□ -1.83
CNTNAP4Q9C0A0 AL138827.1-201ENST00000402666 306 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms