Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC008873.1-201ENST00000625051 138 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 AC092435.3-201ENST00000565538 3654 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 AC068700.1-201ENST00000565862 3754 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 U3.8-201ENST00000363675 217 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.215-201ENST00000364204 112 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.287-201ENST00000364853 94 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 SNORA72.4-201ENST00000384174 132 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 MIR634-201ENST00000385208 97 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 RNA5SP252-201ENST00000391131 119 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 RNU2-51P-201ENST00000410708 197 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 EBAG9P1-201ENST00000418955 543 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 AC112771.1-201ENST00000463581 102 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 uc_338.14-201ENST00000613162 166 ntBASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXP3Q9BZS1 AL365361.1-201ENST00000566942 3481 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 RNU6-103P-201ENST00000363686 107 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.368-201ENST00000365547 113 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 RNU6-22P-201ENST00000384355 107 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 RNU6-239P-201ENST00000390990 99 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 AL365496.1-201ENST00000426885 215 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.797-201ENST00000515977 94 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 SNORD116-25-201ENST00000516517 92 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 RNU6-711P-201ENST00000517255 106 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 IGKV2-26-201ENST00000518305 343 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 AC021269.2-201ENST00000532318 330 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.778-201ENST00000620203 90 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 MIR8057-201ENST00000620957 69 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 U6.115-201ENST00000636045 103 ntBASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXP3Q9BZS1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 MIR626-201ENST00000385032 94 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 AL355497.1-201ENST00000406262 551 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 SNORA11.2-201ENST00000408318 127 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 SNORA59A-201ENST00000459326 152 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 AC006445.1-201ENST00000491925 405 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 AC093663.1-201ENST00000497190 394 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 RNU6-479P-201ENST00000516348 105 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 RNU7-121P-201ENST00000516604 62 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 MIR4744-201ENST00000581563 82 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 RPL17P51-201ENST00000605218 238 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 YPEL5P2-201ENST00000605553 359 ntBASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXP3Q9BZS1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
FOXP3Q9BZS1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
FOXP3Q9BZS1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 snoU2_19.1-201ENST00000362361 80 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 RNU1-70P-201ENST00000362618 164 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 RNU6-899P-201ENST00000363947 107 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 snoU2_19.4-201ENST00000364329 80 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 SNORD50B-201ENST00000364995 70 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 SNORA8.3-201ENST00000384679 139 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 SNORA46-201ENST00000384762 135 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 RNU6-578P-201ENST00000390980 103 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.586-201ENST00000391146 98 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 CR769767.1-201ENST00000436337 346 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 UQCRHP3-201ENST00000451503 251 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 RPL36AP48-201ENST00000485521 314 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 RN7SKP282-201ENST00000516824 299 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 MIR3684-201ENST00000579779 74 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 MIR4431-201ENST00000579990 94 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 AC069294.1-201ENST00000608397 350 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 AC006111.3-201ENST00000622137 383 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 AC091895.1-201ENST00000624494 256 ntBASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
FOXP3Q9BZS1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 AC134026.1-201ENST00000623249 2239 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 RNU6-151P-201ENST00000364158 107 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.310-201ENST00000365063 113 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.456-201ENST00000384232 111 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 MIR548B-201ENST00000385247 97 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 RNU6-855P-201ENST00000410395 104 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 RN7SL504P-201ENST00000494496 287 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms