Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU6-879P-201ENST00000364328 108 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 RNU6-740P-201ENST00000364734 105 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 SNORD115-38-201ENST00000365037 82 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 RNU6-326P-201ENST00000365480 107 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 SNORA53-201ENST00000391141 249 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 RNA5SP425-201ENST00000410336 112 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 AP000870.1-201ENST00000472927 406 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 AC074198.2-201ENST00000508153 258 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 SNORD116-28-201ENST00000516123 91 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 RNU6-861P-201ENST00000516745 106 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 AL356280.1-201ENST00000603614 379 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 RPL17P51-201ENST00000605218 238 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 SNORD113-5-201ENST00000607261 78 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 AC022149.2-201ENST00000621061 203 ntBASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LRFN3Q9BTN0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 AC096644.4-201ENST00000563417 2912 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNA5SP361-201ENST00000362686 118 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU6-461P-201ENST00000364195 107 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU6-283P-201ENST00000364788 107 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU1-139P-201ENST00000391307 165 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU4-30P-201ENST00000410245 143 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 SNORD12B-201ENST00000410433 91 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU2-63P-201ENST00000410792 194 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 AL606753.1-201ENST00000427435 87 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 COX6CP14-201ENST00000469580 174 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 AC145146.1-201ENST00000496370 254 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU6-1114P-201ENST00000516022 107 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU2-31P-201ENST00000516954 155 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 RNU6-586P-201ENST00000517265 104 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 Z83818.1-201ENST00000603584 150 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 AC090517.3-201ENST00000625170 141 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 AC132825.6-201ENST00000638861 357 ntBASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LRFN3Q9BTN0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 snoU2_19.1-201ENST00000362361 80 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 RNU4-15P-201ENST00000362613 141 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.122-201ENST00000363331 96 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 RNU6-47P-201ENST00000383866 107 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 MIR489-201ENST00000384923 84 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 RNA5SP201-201ENST00000410316 124 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 RPL23AP36-201ENST00000413895 458 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 MTATP6P29-201ENST00000415057 132 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 AC022559.1-201ENST00000520905 205 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 MIR4738-201ENST00000579134 87 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 MIR4423-201ENST00000580922 80 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 MIR3117-201ENST00000584034 78 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 AL162424.1-201ENST00000602325 221 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 SNRPGP20-201ENST00000604477 205 ntBASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.96□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.569-201ENST00000384749 103 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 MIR9-1-201ENST00000385198 89 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 FO393413.1-201ENST00000402892 195 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 RNU6-651P-201ENST00000411040 105 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AC009963.1-201ENST00000417265 157 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AC096638.1-201ENST00000444678 216 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 HMGN2P23-201ENST00000456759 269 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 snoU13.6-201ENST00000458785 104 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AC007215.1-201ENST00000464893 276 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 RPL26P26-201ENST00000480251 434 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 MIR4781-201ENST00000585250 76 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AC011921.3-201ENST00000605540 361 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 AC021753.1-201ENST00000635724 168 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.95□□□□□ -1.94
LRFN3Q9BTN0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms