Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU6-221P-201ENST00000459541 99 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RPS29P1-201ENST00000465274 159 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 HMGB1P29-201ENST00000505659 499 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC105758.1-201ENST00000506038 399 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU6-344P-201ENST00000516635 111 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RN7SKP49-201ENST00000516675 260 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU1-117P-201ENST00000517041 158 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC060788.1-201ENST00000521318 469 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
UPK3BQ9BT76 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC004584.2-201ENST00000570407 410 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 MIR5695-201ENST00000579717 85 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 SNORA4-201ENST00000584302 138 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC004223.2-201ENST00000590309 544 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AL390123.1-201ENST00000603216 237 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AL360219.1-201ENST00000610230 366 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC073349.3-201ENST00000617616 186 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.57□□□□□ -2.32
UPK3BQ9BT76 SCARNA4-201ENST00000629045 128 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 U6.108-201ENST00000637764 58 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 Y_RNA.122-201ENST00000363331 96 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 RNU6-1329P-201ENST00000365664 107 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 Y_RNA.508-201ENST00000384502 114 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 MIR200A-201ENST00000384875 90 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 SNORA26.8-201ENST00000391306 124 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.56□□□□□ -2.32
UPK3BQ9BT76 AC005002.2-201ENST00000438228 269 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 SNORD124-201ENST00000459577 104 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.56□□□□□ -2.32
UPK3BQ9BT76 TRBVA-201ENST00000498804 316 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 PDCD5P2-201ENST00000507570 312 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 RNU6-351P-201ENST00000516097 100 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 RNU6-189P-201ENST00000516120 101 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 RNU6-947P-201ENST00000516264 106 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 RNA5SP168-201ENST00000516642 112 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 RNU6-1223P-201ENST00000517124 104 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 MTND1P35-201ENST00000526739 508 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
UPK3BQ9BT76 SCOCP1-201ENST00000554676 349 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 AL354950.2-201ENST00000617939 290 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 FER-210ENST00000628534 558 ntTSL 5 BASIC0.56□□□□□ -2.32
UPK3BQ9BT76 OR5AK4P-201ENST00000635912 903 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 ZNF204P-201ENST00000416749 2397 ntBASIC0.56□□□□□ -2.32
UPK3BQ9BT76 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
UPK3BQ9BT76 Y_RNA.124-201ENST00000363339 93 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 Y_RNA.269-201ENST00000364685 89 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 RNU6-42P-201ENST00000384165 107 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 RNU6-505P-201ENST00000384427 107 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 MIR548J-201ENST00000408833 112 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC114482.1-201ENST00000418010 247 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AL606490.4-201ENST00000423117 127 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC245047.7-201ENST00000440265 293 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC073415.1-201ENST00000449240 153 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 TPTE2P5-203ENST00000458118 728 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 snoU13.18-201ENST00000459483 104 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 RNU7-94P-201ENST00000459576 63 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 BET1P1-201ENST00000482276 359 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 CCDC34P1-201ENST00000507441 517 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 PSMC1P5-201ENST00000512850 177 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 SNORD79.1-201ENST00000516069 84 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC090142.3-201ENST00000519012 385 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC136628.3-201ENST00000521868 290 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC104576.1-201ENST00000524225 88 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AL137100.2-201ENST00000555786 315 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 MIR4698-201ENST00000577795 80 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC087683.1-201ENST00000591187 441 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC109347.2-201ENST00000610220 349 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC106800.4-201ENST00000614905 153 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC091931.1-201ENST00000623488 728 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC139792.3-201ENST00000623525 224 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC008873.1-201ENST00000625051 138 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC008163.1-202ENST00000636004 2889 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC068700.1-201ENST00000565862 3754 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AC018630.2-201ENST00000534866 2403 ntBASIC0.55□□□□□ -2.32
UPK3BQ9BT76 AL442644.1-201ENST00000454390 3105 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 Y_RNA.159-201ENST00000363674 87 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 RNU5A-6P-201ENST00000384136 116 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 SNORA80D-201ENST00000384488 135 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 MIR608-201ENST00000384820 100 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 MIR660-201ENST00000385235 97 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 MTCO2P18-201ENST00000457151 658 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AF186996.7-201ENST00000492781 209 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms