Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU6-948P-201ENST00000516374 107 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.675-201ENST00000516389 149 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 RNU7-30P-201ENST00000516835 62 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 RNU1-54P-201ENST00000517181 120 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 SUMO2P18-201ENST00000518873 252 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AC105029.1-201ENST00000520250 669 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AL590705.4-201ENST00000532209 134 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 GNAI2P1-201ENST00000541815 315 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 MIR4285-201ENST00000581001 85 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 MIR4753-201ENST00000585119 83 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AC011712.1-201ENST00000588959 234 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AC083806.3-201ENST00000614016 455 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AC022306.2-201ENST00000617563 647 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 SNORA33-201ENST00000363664 130 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.390-201ENST00000383932 102 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.404-201ENST00000383978 102 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU6-767P-201ENST00000384132 107 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU6-439P-201ENST00000384188 106 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 MIR548B-201ENST00000385247 97 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU1-139P-201ENST00000391307 165 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1050P-201ENST00000410388 107 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RN7SKP51-201ENST00000410781 304 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 CYCSP49-201ENST00000420810 319 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AL139396.1-201ENST00000421137 167 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 MTND3P23-201ENST00000431980 347 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 HMGN2P34-201ENST00000437647 269 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 NDUFB4P10-201ENST00000452541 359 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU6-221P-201ENST00000459541 99 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AP000870.1-201ENST00000472927 406 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AC091179.3-201ENST00000474761 144 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AC116353.2-201ENST00000505332 712 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 YWHAEP4-201ENST00000505390 198 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU6-295P-201ENST00000516901 104 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1198P-201ENST00000516904 67 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 MIR4255-201ENST00000579351 72 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AL355802.3-201ENST00000607571 545 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 SNORD11B-201ENST00000607707 90 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AC013412.1-201ENST00000610687 192 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AC126177.8-201ENST00000618339 1015 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 AL359697.1-201ENST00000624879 587 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 U6.108-201ENST00000637764 58 ntBASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
HDHD3Q9BSH5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 RNU6-661P-201ENST00000362409 107 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1305P-201ENST00000364353 104 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 RNU6-281P-201ENST00000384212 103 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.482-201ENST00000384377 111 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AC074085.1-201ENST00000413598 418 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AL354695.1-201ENST00000427935 228 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AL445305.1-201ENST00000432577 575 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 HMGN2P23-201ENST00000456759 269 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 RNU7-57P-201ENST00000459540 60 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AC008834.1-201ENST00000511612 175 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AC093303.1-201ENST00000514549 295 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 SNORA25.14-201ENST00000516481 132 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 RNA5SP437-201ENST00000517249 129 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AC025647.1-201ENST00000517879 253 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AC134698.4-201ENST00000523451 826 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AC084364.2-201ENST00000546924 395 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 SNORA77B-201ENST00000578179 125 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 MIR4273-201ENST00000582824 84 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 AP000648.3-201ENST00000623539 4507 ntBASIC1.23□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.160-201ENST00000363677 92 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 RNU1-42P-201ENST00000364033 160 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 SNORD87-201ENST00000364849 89 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 RNA5SP126-201ENST00000365092 109 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 SNORD81.2-201ENST00000365153 76 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.415-201ENST00000384012 112 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AL033519.2-201ENST00000403958 392 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 MIR1185-2-201ENST00000408687 86 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AC138393.2-201ENST00000414742 246 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 CST2P1-201ENST00000425770 87 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 EIF1P2-201ENST00000428233 350 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 MTND3P10-201ENST00000450967 341 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AC103851.1-201ENST00000506833 274 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 RNU7-175P-201ENST00000515915 61 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 SNORA20.3-201ENST00000516880 132 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AC015720.1-201ENST00000565251 277 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AC125232.2-201ENST00000592457 143 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 MZT1P2-201ENST00000604387 248 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AC116312.1-201ENST00000606841 314 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms