Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 AC243428.1-201ENST00000421099 264 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AL139396.1-201ENST00000421137 167 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC069257.2-201ENST00000441819 155 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC016717.1-201ENST00000448918 286 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC011352.1-201ENST00000512300 793 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-1146P-201ENST00000516282 102 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-566P-201ENST00000516790 107 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-1088P-201ENST00000516850 104 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-58P-201ENST00000517143 103 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC027288.2-201ENST00000553028 243 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 DNAJC19P9-201ENST00000555084 351 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC139792.2-201ENST00000624218 587 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 MIR338-201ENST00000636369 67 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC068137.4-201ENST00000638485 296 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 AC073869.6-201ENST00000640656 341 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 snoU2-30.2-201ENST00000362805 70 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-414P-201ENST00000363705 104 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 RNU5F-3P-201ENST00000363767 117 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 SNORA63D-201ENST00000364359 132 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 SNORA72.2-201ENST00000365028 127 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-17P-201ENST00000384245 107 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 Y_RNA.490-201ENST00000384413 102 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-18P-201ENST00000384527 107 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 MIR515-2-201ENST00000384883 83 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 MIR515-1-201ENST00000384884 83 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 MTCO3P29-201ENST00000432119 779 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 AC092989.1-201ENST00000481235 277 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 HMGN1P13-201ENST00000505795 138 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-718P-201ENST00000516166 105 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 RNU1-54P-201ENST00000517181 120 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 MIR4769-201ENST00000584126 77 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 AC018638.8-201ENST00000588755 281 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 AC126177.8-201ENST00000618339 1015 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 AC068205.3-201ENST00000636385 468 ntBASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
KLHDC3Q9BQ90 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-541P-201ENST00000384709 110 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-360P-201ENST00000390944 104 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RNU2-7P-201ENST00000410794 178 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 EIF1P1-201ENST00000421436 341 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 FTH1P12-201ENST00000432137 551 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RNU7-57P-201ENST00000459540 60 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 FO393415.2-201ENST00000480085 343 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RPL30P10-201ENST00000488148 337 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RPL36AP21-201ENST00000490372 323 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 SNORA25.14-201ENST00000516481 132 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RNA5SP481-201ENST00000516814 122 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RNU1-117P-201ENST00000517041 158 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 RNA5SP437-201ENST00000517249 129 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AC084364.2-201ENST00000546924 395 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 SNORD53B-201ENST00000577887 78 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 MIR4273-201ENST00000582824 84 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AC002553.4-201ENST00000616896 331 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AL359757.2-201ENST00000624309 274 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 snoZ196.1-201ENST00000625269 89 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 ZNF299P-201ENST00000406845 1804 ntBASIC1.31□□□□□ -2.2
KLHDC3Q9BQ90 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-873P-201ENST00000363833 107 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-280P-201ENST00000364145 104 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 Y_RNA.301-201ENST00000364990 103 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 MIR517C-201ENST00000385103 95 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 AL356776.1-201ENST00000406574 447 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 RNA5SP504-201ENST00000410676 117 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-57P-201ENST00000411348 103 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 AC007098.1-201ENST00000420122 367 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 AC008134.1-201ENST00000420943 193 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 HSPE1P9-201ENST00000440046 311 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 RN7SKP210-201ENST00000459176 261 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 RNU4-49P-201ENST00000516080 140 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 AC134698.4-201ENST00000523451 826 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 MIR4790-201ENST00000577799 79 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 AC006001.4-201ENST00000622243 395 ntBASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.3□□□□□ -2.2
KLHDC3Q9BQ90 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 Y_RNA.533-201ENST00000384596 114 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-159P-201ENST00000391080 106 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-510P-201ENST00000391239 108 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms