Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.29□□□□□ -2.2
CDX2Q99626 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.29□□□□□ -2.2
CDX2Q99626 DISC2.1-201ENST00000612827 205 ntBASIC1.29□□□□□ -2.2
CDX2Q99626 Y_RNA.804-201ENST00000615262 101 ntBASIC1.29□□□□□ -2.2
CDX2Q99626 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.29□□□□□ -2.2
CDX2Q99626 SNORA43.4-201ENST00000629559 138 ntBASIC1.29□□□□□ -2.2
CDX2Q99626 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDX2Q99626 Y_RNA.58-201ENST00000362807 102 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 Y_RNA.100-201ENST00000363141 102 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 Y_RNA.154-201ENST00000363624 102 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 RNA5SP493-201ENST00000364115 91 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 SNORD114-6-201ENST00000364393 72 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 Y_RNA.301-201ENST00000364990 103 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 RNY3P1-201ENST00000365085 102 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 RNY3-201ENST00000365484 102 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 Y_RNA.481-201ENST00000384373 102 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 Y_RNA.490-201ENST00000384413 102 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 SNORD73A-201ENST00000386062 65 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 SNORD37.1-201ENST00000390968 65 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 RNU11-3P-201ENST00000391111 133 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 RNU6-955P-201ENST00000410497 104 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC022028.1-201ENST00000412054 408 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 RPL21P111-201ENST00000418453 477 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.28□□□□□ -2.2
CDX2Q99626 ERLEC1P1-201ENST00000433806 578 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC244670.1-201ENST00000436879 112 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.28□□□□□ -2.2
CDX2Q99626 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.28□□□□□ -2.2
CDX2Q99626 RNU1-131P-201ENST00000458943 161 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC103851.1-201ENST00000506833 274 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 FAM206BP-201ENST00000510179 541 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 MIR3941-201ENST00000582572 103 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.28□□□□□ -2.2
CDX2Q99626 AC018638.8-201ENST00000588755 281 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 C8orf59P2-201ENST00000603441 271 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC092747.3-201ENST00000603769 301 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC211469.2-201ENST00000605461 205 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC022140.2-201ENST00000623500 188 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC009033.1-201ENST00000624279 431 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 AC099654.5-201ENST00000636479 350 ntBASIC1.28□□□□□ -2.2
CDX2Q99626 CBX3P1-201ENST00000325243 554 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CDX2Q99626 RNU6-1245P-201ENST00000411130 106 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AC007098.1-201ENST00000420122 367 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.27□□□□□ -2.21
CDX2Q99626 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.27□□□□□ -2.21
CDX2Q99626 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.27□□□□□ -2.21
CDX2Q99626 MTND5P20-201ENST00000448677 143 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 RNU6-1208P-201ENST00000459588 107 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 TRBVA-201ENST00000498804 316 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AC079140.5-201ENST00000507882 310 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AC091874.1-201ENST00000511402 339 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 RNU6-277P-201ENST00000516272 106 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 RNVU1-2-201ENST00000516326 135 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 RNU6-1153P-201ENST00000516760 105 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 RNU7-30P-201ENST00000516835 62 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.27□□□□□ -2.21
CDX2Q99626 MIR4742-201ENST00000581069 85 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 MIR5692C1-201ENST00000585309 91 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AL117336.2-201ENST00000602435 335 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AP001836.1-201ENST00000604675 523 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AC016925.2-201ENST00000605108 242 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AP000654.2-201ENST00000605633 586 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 AC005520.5-201ENST00000613926 164 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 U1.36-201ENST00000620684 176 ntBASIC1.27□□□□□ -2.21
CDX2Q99626 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDX2Q99626 MTND5P9-201ENST00000503854 1755 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 AC092268.1-201ENST00000342691 405 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-845P-201ENST00000362578 103 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-254P-201ENST00000363377 107 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 Y_RNA.132-201ENST00000363421 102 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-694P-201ENST00000364071 147 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-743P-201ENST00000364151 106 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-827P-201ENST00000365553 106 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 Y_RNA.419-201ENST00000384041 102 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 Y_RNA.474-201ENST00000384341 102 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 Y_RNA.509-201ENST00000384506 99 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-160P-201ENST00000384591 107 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDX2Q99626 AL357139.1-201ENST00000407792 426 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 AL590135.1-201ENST00000422215 156 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 AC019205.3-201ENST00000424573 156 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.26□□□□□ -2.21
CDX2Q99626 RPS3AP52-201ENST00000435639 297 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 AC016700.2-201ENST00000446011 156 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-329P-201ENST00000459618 107 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RPL31P58-201ENST00000469001 379 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 AC015911.1-201ENST00000495111 156 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-120P-201ENST00000516077 103 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 Y_RNA.702-201ENST00000516843 96 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 SNORD60.2-201ENST00000516883 86 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 SNORA44.1-201ENST00000517031 108 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 RNU6-1213P-201ENST00000517075 94 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 MTND4P7-201ENST00000523876 130 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 AP005597.4-201ENST00000526762 229 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.26□□□□□ -2.21
CDX2Q99626 AC103996.1-201ENST00000555468 102 ntBASIC1.26□□□□□ -2.21
CDX2Q99626 CYP3A137P-201ENST00000562436 69 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms