Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC098869.1-201ENST00000481627 292 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 AC105417.1-201ENST00000514691 285 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 RNU6-917P-201ENST00000516294 104 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 RNU7-128P-201ENST00000517247 62 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 MTND2P32-201ENST00000521584 1038 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 AC025449.1-201ENST00000603896 529 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 PRELID3BP2-201ENST00000605362 201 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 AP001596.2-201ENST00000608410 312 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 MIR6515-201ENST00000619843 57 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 AC008873.1-201ENST00000625051 138 ntBASIC0.39□□□□□ -2.35
CCL13Q99616 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CCL13Q99616 RNU6-1286P-201ENST00000383871 107 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 SNORD116-13-201ENST00000384408 92 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL13Q99616 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL13Q99616 MTCO2P34-201ENST00000421994 607 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.38□□□□□ -2.35
CCL13Q99616 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.38□□□□□ -2.35
CCL13Q99616 RNU6-1037P-201ENST00000459571 107 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 AL049830.1-201ENST00000468034 425 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL13Q99616 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.38□□□□□ -2.35
CCL13Q99616 AC113410.1-201ENST00000505029 247 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL13Q99616 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL13Q99616 U2.17-201ENST00000611454 95 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 AC139792.3-201ENST00000623525 224 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 AL442644.1-201ENST00000454390 3105 ntBASIC0.38□□□□□ -2.35
CCL13Q99616 U3.8-201ENST00000363675 217 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 SNORA2.2-201ENST00000365473 135 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 SNORD73A-201ENST00000386062 65 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 RNU1-139P-201ENST00000391307 165 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 RNU2-29P-201ENST00000410423 189 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 AL354692.1-201ENST00000423044 315 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.37□□□□□ -2.35
CCL13Q99616 STAG3L5P-204ENST00000443759 179 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.37□□□□□ -2.35
CCL13Q99616 AC022364.2-201ENST00000457963 554 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 RNU7-94P-201ENST00000459576 63 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 MTND2P14-201ENST00000482139 351 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 RNU7-99P-201ENST00000516271 62 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 AP002001.1-203ENST00000534002 267 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 SNORA28-201ENST00000606769 126 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 AL391834.2-201ENST00000609982 546 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
CCL13Q99616 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CCL13Q99616 RNU6-1335P-201ENST00000365426 107 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 Y_RNA.508-201ENST00000384502 114 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 MIR320B2-201ENST00000408479 138 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.36□□□□□ -2.35
CCL13Q99616 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.36□□□□□ -2.35
CCL13Q99616 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.36□□□□□ -2.35
CCL13Q99616 MTND3P9-201ENST00000429526 346 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 AL445305.1-201ENST00000432577 575 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CCL13Q99616 RNU7-138P-201ENST00000459479 64 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 RNU6-344P-201ENST00000516635 111 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 AL137161.1-201ENST00000532231 390 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 U6.73-201ENST00000619194 103 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 SCARNA4-201ENST00000629045 128 ntBASIC0.36□□□□□ -2.35
CCL13Q99616 RNU6-1214P-201ENST00000363650 109 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.35□□□□□ -2.35
CCL13Q99616 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.35□□□□□ -2.35
CCL13Q99616 RNU6-606P-201ENST00000384721 111 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 MIR936-201ENST00000401264 98 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 Z99497.1-201ENST00000421282 135 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 AL593851.1-201ENST00000426171 157 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 AC245047.8-201ENST00000456455 284 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 snoU13.18-201ENST00000459483 104 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 AC022493.2-201ENST00000506122 481 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.35□□□□□ -2.35
CCL13Q99616 SNORA70.12-201ENST00000516084 153 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 RNU1-117P-201ENST00000517041 158 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 MRPS36P4-201ENST00000534436 298 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 SUB1P2-201ENST00000556401 297 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.35□□□□□ -2.35
CCL13Q99616 RMST_3.1-201ENST00000611651 109 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 AC004223.4-201ENST00000612426 332 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 ELL2P3-201ENST00000457883 1602 ntBASIC0.35□□□□□ -2.35
CCL13Q99616 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CCL13Q99616 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 RNU6-456P-201ENST00000384493 107 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 SNORD99-201ENST00000408612 74 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 CALM2P4-201ENST00000430810 426 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL13Q99616 TPT1P7-201ENST00000458300 517 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.34□□□□□ -2.36
CCL13Q99616 MTATP6P9-201ENST00000515039 680 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 RNU6-496P-201ENST00000516145 99 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 Y_RNA.673-201ENST00000516306 88 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 RNA5SP454-201ENST00000517231 127 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL13Q99616 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL13Q99616 FGF7P1-201ENST00000582820 288 ntBASIC0.34□□□□□ -2.36
CCL13Q99616 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms