Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC007395.1-201ENST00000451333 677 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 PCNPP5-201ENST00000452246 481 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.79□□□□□ -1.96
NUP88Q99567 AC114982.1-201ENST00000469402 321 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 AC093852.1-201ENST00000503587 266 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 CYCSP23-201ENST00000519781 313 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 AC022432.1-201ENST00000595739 310 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 AC104695.3-201ENST00000604052 296 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 AC068205.3-201ENST00000636385 468 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUP88Q99567 AC131280.1-202ENST00000624067 4211 ntBASIC2.79□□□□□ -1.96
NUP88Q99567 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
NUP88Q99567 SNORD115-3-201ENST00000363100 82 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 U8.2-201ENST00000363156 134 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 Y_RNA.162-201ENST00000363683 102 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 RNU6-1145P-201ENST00000384246 107 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 RNU6-823P-201ENST00000391042 103 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 Y_RNA.645-201ENST00000391229 102 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 MIR1283-1-201ENST00000408494 87 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 SDAD1P3-201ENST00000427380 333 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 AL137159.1-201ENST00000452808 512 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 PRELID3BP1-201ENST00000457142 540 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 AC010469.2-201ENST00000496412 480 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 AC093259.1-201ENST00000509755 300 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 SNORA40.9-201ENST00000515895 93 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 SCARNA15.1-201ENST00000516384 125 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 AC022616.4-201ENST00000522985 181 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 PRELID2P1-201ENST00000552837 301 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 AC026271.5-201ENST00000577873 130 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 MIR4659A-201ENST00000580269 81 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 AC010297.1-201ENST00000623948 149 ntBASIC2.78□□□□□ -1.96
NUP88Q99567 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.78□□□□□ -1.96
NUP88Q99567 AC245060.5-201ENST00000610778 3293 ntBASIC2.77□□□□□ -1.97
NUP88Q99567 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NUP88Q99567 Y_RNA.498-201ENST00000384460 102 ntBASIC2.77□□□□□ -1.97
NUP88Q99567 RNU6-1160P-201ENST00000384546 104 ntBASIC2.77□□□□□ -1.97
NUP88Q99567 RNU2-48P-201ENST00000410694 191 ntBASIC2.77□□□□□ -1.97
NUP88Q99567 RNU6-625P-201ENST00000459412 107 ntBASIC2.77□□□□□ -1.97
NUP88Q99567 RNU6-764P-201ENST00000516396 105 ntBASIC2.77□□□□□ -1.97
NUP88Q99567 MIR1291-201ENST00000627649 87 ntBASIC2.77□□□□□ -1.97
NUP88Q99567 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NUP88Q99567 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
NUP88Q99567 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.76□□□□□ -1.97
NUP88Q99567 AC113618.1-201ENST00000416747 285 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP88Q99567 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.76□□□□□ -1.97
NUP88Q99567 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
NUP88Q99567 RNU6-408P-201ENST00000515910 100 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 RNU6-397P-201ENST00000516226 104 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 RNU6-1137P-201ENST00000517073 99 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 Y_RNA.715-201ENST00000517082 110 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 CYCSP26-201ENST00000534107 320 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 NDUFA5P6-201ENST00000542110 379 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP88Q99567 AL357075.2-201ENST00000614906 189 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 MTND5P6-201ENST00000422338 1798 ntBASIC2.76□□□□□ -1.97
NUP88Q99567 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP88Q99567 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP88Q99567 MIR586-201ENST00000385035 97 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 RN7SKP223-201ENST00000410582 62 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 DPH3P2-201ENST00000422618 250 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.75□□□□□ -1.97
NUP88Q99567 AC245102.2-201ENST00000448956 180 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.75□□□□□ -1.97
NUP88Q99567 U8.20-201ENST00000459445 131 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 HMGN2P9-201ENST00000476875 229 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 YWHAEP4-201ENST00000505390 198 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.75□□□□□ -1.97
NUP88Q99567 AC018448.1-201ENST00000552843 316 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 AL360085.1-201ENST00000604713 532 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 AL121655.1-201ENST00000605811 308 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 Y_RNA.772-201ENST00000606692 102 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 AC240442.1-201ENST00000616055 283 ntBASIC2.75□□□□□ -1.97
NUP88Q99567 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
NUP88Q99567 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP88Q99567 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NUP88Q99567 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 SRIP3-201ENST00000413200 219 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 AL121890.1-201ENST00000435457 205 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 AC074133.1-201ENST00000515696 183 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 RNU6-327P-201ENST00000516270 127 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 RNU6-1012P-201ENST00000516606 109 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 AC008737.2-201ENST00000599446 118 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.74□□□□□ -1.97
NUP88Q99567 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.74□□□□□ -1.97
NUP88Q99567 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NUP88Q99567 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NUP88Q99567 AC016717.2-201ENST00000609089 5141 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 Y_RNA.152-201ENST00000363578 100 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 SNORA72.2-201ENST00000365028 127 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 SNORA63.7-201ENST00000365579 123 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 RNU6-418P-201ENST00000384035 107 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 Y_RNA.439-201ENST00000384119 94 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 RNU1-148P-201ENST00000384472 162 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 RNU6-985P-201ENST00000410182 104 ntBASIC2.73□□□□□ -1.97
NUP88Q99567 RNA5SP504-201ENST00000410676 117 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 343.7 ms