Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AL590705.4-201ENST00000532209 134 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN2AQ99250 AC022254.1-201ENST00000567857 235 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 AC005899.2-201ENST00000584353 90 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 AC022306.2-201ENST00000617563 647 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.36□□□□□ -2.19
SCN2AQ99250 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SCN2AQ99250 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.36□□□□□ -2.19
SCN2AQ99250 RNU6-1019P-201ENST00000364424 107 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AC004866.1-201ENST00000411748 78 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AL590632.1-201ENST00000424289 371 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 MTND2P29-201ENST00000438595 412 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AC019176.1-201ENST00000518519 225 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AC016727.2-201ENST00000603988 621 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 MIR3976-201ENST00000606807 139 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2AQ99250 BX322639.1-202ENST00000423987 2213 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2AQ99250 SNORD115-3-201ENST00000363100 82 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 Y_RNA.146-201ENST00000363549 102 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 RNU6-392P-201ENST00000364926 101 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 MIR518A2-201ENST00000384966 87 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SCN2AQ99250 SNORA75.4-201ENST00000391278 119 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2AQ99250 EIF4EP2-201ENST00000422816 654 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 RBMX2P4-201ENST00000441256 376 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AC005730.3-201ENST00000583067 366 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AC008749.1-201ENST00000597650 306 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 RBM11P1-201ENST00000604951 799 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AL355802.3-201ENST00000607571 545 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AL353149.1-201ENST00000610667 244 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2AQ99250 AC022202.1-201ENST00000613515 211 ntBASIC1.35□□□□□ -2.19
SCN2AQ99250 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN2AQ99250 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.34□□□□□ -2.19
SCN2AQ99250 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SCN2AQ99250 U3.9-201ENST00000363823 204 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 RNU6-280P-201ENST00000364145 104 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 RNU6-596P-201ENST00000365395 98 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 MIR320B2-201ENST00000408479 138 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 RPL21P111-201ENST00000418453 477 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 USP9YP30-201ENST00000430729 455 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 AC027575.1-201ENST00000481064 460 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 RNA5SP384-201ENST00000516615 116 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 RNU6-1098P-201ENST00000516772 96 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 Y_RNA.706-201ENST00000516933 99 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN2AQ99250 MIR3169-201ENST00000578032 83 ntBASIC1.34□□□□□ -2.19
SCN2AQ99250 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 SNORD32B-201ENST00000364460 84 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 SNORA16B-201ENST00000364674 135 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 SNORA12.2-201ENST00000391040 156 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AL356776.1-201ENST00000406574 447 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MTCYBP10-201ENST00000424905 650 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MTND3P10-201ENST00000450967 341 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC145146.1-201ENST00000496370 254 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MTCYBP18-201ENST00000501056 747 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC026782.1-201ENST00000512952 449 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2AQ99250 AC006600.1-201ENST00000572529 153 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MIR4713-201ENST00000582691 75 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MIR4753-201ENST00000585119 83 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC011712.1-201ENST00000588959 234 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN2AQ99250 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC091932.3-201ENST00000624223 323 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 ZNF702P-202ENST00000434269 1966 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN2AQ99250 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 SNORA36A-201ENST00000384221 132 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 Y_RNA.540-201ENST00000384638 111 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MIR499A-201ENST00000384903 122 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MIR548F5-201ENST00000408421 86 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC009310.1-201ENST00000414414 451 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC060773.1-201ENST00000421698 310 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 USP9YP28-201ENST00000435142 589 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2AQ99250 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2AQ99250 AC007215.1-201ENST00000464893 276 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2AQ99250 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2AQ99250 AC004584.2-201ENST00000570407 410 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 SNORA4-201ENST00000584302 138 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 MZT1P2-201ENST00000604387 248 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AC069114.2-201ENST00000604699 304 ntBASIC1.33□□□□□ -2.2
SCN2AQ99250 AL353770.2-201ENST00000620024 78 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms