Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 MIR1185-1-201ENST00000408598 86 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 RNU6-387P-201ENST00000411331 105 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 HMGN1P10-201ENST00000474557 553 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 RNU7-12P-201ENST00000516030 62 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 RNU11-2P-201ENST00000516898 142 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 RNA5SP337-201ENST00000517007 109 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 RNU6-685P-201ENST00000517088 95 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 AC022616.6-201ENST00000520479 119 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 MTND3P19-201ENST00000603825 345 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 AC112187.2-201ENST00000604345 283 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 AC122133.1-201ENST00000613964 233 ntBASIC-0.22□□□□□ -2.44
CCDC115Q96NT0 MIR1-1-201ENST00000362147 71 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 RNU6-61P-201ENST00000365528 109 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 ERHP2-201ENST00000402323 299 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 RNU2-39P-201ENST00000410604 198 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 AC009237.7-201ENST00000447357 229 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 ELOCP24-201ENST00000456370 334 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 RPL23AP54-201ENST00000495129 419 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 RNU7-99P-201ENST00000516271 62 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 snoZ196.1-201ENST00000625269 89 ntBASIC-0.23□□□□□ -2.45
CCDC115Q96NT0 RNU6V-201ENST00000384105 107 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 SNORA40.8-201ENST00000411034 126 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 AP000870.1-201ENST00000472927 406 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 AC104136.1-201ENST00000512969 394 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 RNU6-863P-201ENST00000515989 104 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 7SK.7-201ENST00000603504 247 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 AP001836.1-201ENST00000604675 523 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 AC067863.3-201ENST00000624172 122 ntBASIC-0.24□□□□□ -2.45
CCDC115Q96NT0 RNU6-39P-201ENST00000384344 107 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 AL136310.1-201ENST00000404926 654 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 AL117339.3-201ENST00000418733 162 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 MED13P1-201ENST00000428342 171 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 MIR3678-201ENST00000578455 94 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 AL117336.2-201ENST00000602435 335 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 U6.73-201ENST00000619194 103 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 AC019226.2-201ENST00000625973 424 ntBASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CCDC115Q96NT0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 SNORA25.3-201ENST00000363205 127 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 SNORA32.1-201ENST00000364514 115 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 RNA5SP496-201ENST00000391240 109 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 RNU2-8P-201ENST00000410727 190 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 RNU6-221P-201ENST00000459541 99 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 MTCO2P29-201ENST00000465212 189 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 AC104695.3-201ENST00000604052 296 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 AC068792.1-201ENST00000621354 417 ntBASIC-0.26□□□□□ -2.45
CCDC115Q96NT0 SNORD113.3-201ENST00000364630 78 ntBASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 RNU6-641P-201ENST00000384006 107 ntBASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 MIR558-201ENST00000384920 94 ntBASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 RPS24P1-201ENST00000438550 371 ntBASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 AC116347.2-201ENST00000514912 523 ntBASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 RNU7-28P-201ENST00000516759 62 ntBASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.27□□□□□ -2.45
CCDC115Q96NT0 RNA5SP517-201ENST00000364724 117 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 RPL37P21-201ENST00000435890 276 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 RPL22P17-201ENST00000438729 315 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 snoU13.6-201ENST00000458785 104 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 AP003049.1-201ENST00000529418 457 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 AC141557.1-201ENST00000540982 400 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 AC104408.1-201ENST00000605241 170 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 AL121895.2-201ENST00000619558 447 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 AL078596.1-201ENST00000624856 447 ntBASIC-0.28□□□□□ -2.45
CCDC115Q96NT0 MIR526A1-201ENST00000384897 85 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 MIR625-201ENST00000385047 85 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 AC004866.1-201ENST00000411748 78 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 MTCO3P8-201ENST00000453691 755 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 AC103996.1-201ENST00000555468 102 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 AC112693.2-201ENST00000556538 232 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 AC090517.2-201ENST00000614966 680 ntBASIC-0.29□□□□□ -2.46
CCDC115Q96NT0 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.3□□□□□ -2.46
CCDC115Q96NT0 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms