Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 Y_RNA.296-201ENST00000364930 108 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 RNU4-66P-201ENST00000365199 138 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 Y_RNA.378-201ENST00000365652 113 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 MIR193B-201ENST00000384907 83 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 AL663109.1-201ENST00000411498 844 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 HMGN2P34-201ENST00000437647 269 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.1□□□□□ -2.23
USP47Q96K76 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.1□□□□□ -2.23
USP47Q96K76 RNA5SP401-201ENST00000515920 127 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 RNU6-351P-201ENST00000516097 100 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.1□□□□□ -2.23
USP47Q96K76 AL442163.3-201ENST00000554110 156 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 FGF7P1-201ENST00000582820 288 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 AC119751.7-201ENST00000600494 245 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 AL365434.2-201ENST00000607979 234 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 AC009033.1-201ENST00000624279 431 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 FER-210ENST00000628534 558 ntTSL 5 BASIC1.1□□□□□ -2.23
USP47Q96K76 OR5AK4P-201ENST00000635912 903 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 RNU6-968P-201ENST00000384076 107 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 RNU6-38P-201ENST00000384085 107 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 RNY3P9-201ENST00000384727 106 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 RNA5SP467-201ENST00000391274 118 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
USP47Q96K76 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.09□□□□□ -2.23
USP47Q96K76 RPS26P42-201ENST00000413485 326 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.09□□□□□ -2.23
USP47Q96K76 AC009237.7-201ENST00000447357 229 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 RNU7-57P-201ENST00000459540 60 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 AL163195.1-201ENST00000496941 348 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 HMGN1P12-201ENST00000499125 195 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.09□□□□□ -2.23
USP47Q96K76 RNU6-1146P-201ENST00000516282 102 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.09□□□□□ -2.23
USP47Q96K76 RAB11AP2-201ENST00000545905 639 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 SCOCP1-201ENST00000554676 349 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 AL157687.1-201ENST00000554853 619 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 AL118558.2-201ENST00000556294 238 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 MIR5692C1-201ENST00000585309 91 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 AC063944.3-201ENST00000609969 533 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 MIR6513-201ENST00000621188 64 ntBASIC1.09□□□□□ -2.23
USP47Q96K76 AL442644.1-201ENST00000454390 3105 ntBASIC1.09□□□□□ -2.24
USP47Q96K76 SNORA72.2-201ENST00000365028 127 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 MIR1253-201ENST00000408273 105 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.08□□□□□ -2.24
USP47Q96K76 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.08□□□□□ -2.24
USP47Q96K76 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.08□□□□□ -2.24
USP47Q96K76 SRRM1P2-201ENST00000464531 1192 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 AC007215.1-201ENST00000464893 276 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 RN7SKP298-201ENST00000515950 94 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 AL512310.8-201ENST00000550183 120 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 MIR4742-201ENST00000581069 85 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 MZT1P2-201ENST00000604387 248 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 SNRPGP20-201ENST00000604477 205 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 AL355802.3-201ENST00000607571 545 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 AC007742.2-201ENST00000618226 398 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.08□□□□□ -2.24
USP47Q96K76 Y_RNA.287-201ENST00000364853 94 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 RNA5SP259-201ENST00000365541 109 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 MIR521-1-201ENST00000384902 87 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 RNU6-57P-201ENST00000411348 103 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 AC092447.3-201ENST00000426027 686 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.08□□□□□ -2.24
USP47Q96K76 RNU7-34P-201ENST00000459394 64 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.08□□□□□ -2.24
USP47Q96K76 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 HMGB1P29-201ENST00000505659 499 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 SNORA40.12-201ENST00000516329 111 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
USP47Q96K76 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USP47Q96K76 AC040896.1-201ENST00000613819 479 ntBASIC1.08□□□□□ -2.24
USP47Q96K76 RNA5SP457-201ENST00000363657 124 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
USP47Q96K76 RNA5SP109-201ENST00000391010 116 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 RNA5SP323-201ENST00000391094 133 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 RNU6-325P-201ENST00000411132 105 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.07□□□□□ -2.24
USP47Q96K76 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.07□□□□□ -2.24
USP47Q96K76 MRPS10P2-201ENST00000431226 381 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AL359672.1-201ENST00000442302 409 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AC074290.1-201ENST00000448883 135 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AF186996.7-201ENST00000492781 209 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 SUMO2P16-201ENST00000519475 264 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
USP47Q96K76 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.07□□□□□ -2.24
USP47Q96K76 AC133485.1-201ENST00000567176 124 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AC138907.6-201ENST00000568401 126 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 MIR1273G-201ENST00000577677 100 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AC097065.2-201ENST00000608159 533 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AC009509.4-201ENST00000619202 509 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AC068792.1-201ENST00000621354 417 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 AC139792.3-201ENST00000623525 224 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 MTND4P5-201ENST00000435821 1374 ntBASIC1.07□□□□□ -2.24
USP47Q96K76 RNU6-534P-201ENST00000364877 106 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 RNU6-214P-201ENST00000384130 107 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 MIR487A-201ENST00000385009 80 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 357.2 ms