Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 BX322639.1-202ENST00000423987 2213 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 MIR301A-201ENST00000385261 86 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 MTCO2P23-201ENST00000425216 680 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 VN1R10P-201ENST00000447106 875 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 USP9YP25-201ENST00000457708 443 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 SNORD116-30-201ENST00000516468 85 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 BNIP3P24-201ENST00000593398 557 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 AL390123.1-201ENST00000603216 237 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 AC006380.1-201ENST00000603598 186 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 AL136363.2-201ENST00000604173 851 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 AL161798.1-201ENST00000604630 131 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 AC013476.2-201ENST00000614456 459 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 MIR3529-201ENST00000637713 78 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 SNORD115-2-201ENST00000362842 82 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MT-TY-201ENST00000387409 66 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MTND3P20-201ENST00000407663 186 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MIR1302-7-201ENST00000408841 72 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 RNU6-613P-201ENST00000410412 108 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AL133396.1-201ENST00000432048 687 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 TMEM251P1-201ENST00000503717 318 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC022616.3-201ENST00000523940 148 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC018448.1-201ENST00000552843 316 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MIR4300-201ENST00000581016 96 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MTND4P21-201ENST00000453886 1357 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 SEC63P2-201ENST00000503863 1939 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 SNORA26.3-201ENST00000391119 136 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MCFD2P1-201ENST00000417812 300 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AL355994.1-201ENST00000424379 260 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC133104.1-201ENST00000429100 218 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 MTND4P15-201ENST00000437913 1033 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AL392103.1-201ENST00000447000 198 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC090572.1-201ENST00000519251 160 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC133485.4-201ENST00000561835 220 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 Z99497.2-201ENST00000603634 310 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC104073.3-201ENST00000610942 955 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC104260.1-201ENST00000616660 539 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AL159153.1-201ENST00000619688 317 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 AC099654.9-201ENST00000637055 678 ntBASIC-0.6□□□□□ -2.51
SPG11Q96JI7 RNU6-534P-201ENST00000364877 106 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 AC092170.1-201ENST00000440211 356 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 AC116562.3-201ENST00000506136 177 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 RNU6-885P-201ENST00000516607 104 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
SPG11Q96JI7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.61□□□□□ -2.51
SPG11Q96JI7 AC245008.1-201ENST00000608123 476 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 AC019226.1-201ENST00000625666 515 ntBASIC-0.61□□□□□ -2.51
SPG11Q96JI7 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AL592310.1-201ENST00000414330 671 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 CDK8P2-201ENST00000415020 547 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC020550.1-201ENST00000447385 163 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 RNA5SP216-201ENST00000516111 123 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC105029.1-201ENST00000520250 669 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 U6.108-201ENST00000637764 58 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 RNU6-226P-201ENST00000363778 107 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 RNU6-47P-201ENST00000383866 107 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 RNU6-658P-201ENST00000384606 106 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 RPS20P2-201ENST00000402520 389 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC024995.1-201ENST00000523014 93 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 MIR4499-201ENST00000584834 69 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC011451.2-201ENST00000604303 598 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AL356596.1-201ENST00000624230 379 ntBASIC-0.62□□□□□ -2.51
SPG11Q96JI7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
SPG11Q96JI7 SNORA25.7-201ENST00000364375 127 ntBASIC-0.63□□□□□ -2.51
SPG11Q96JI7 RNU6-432P-201ENST00000384196 109 ntBASIC-0.63□□□□□ -2.51
SPG11Q96JI7 RNU6-125P-201ENST00000384505 107 ntBASIC-0.63□□□□□ -2.51
SPG11Q96JI7 MIR891A-201ENST00000401237 79 ntBASIC-0.63□□□□□ -2.51
SPG11Q96JI7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.63□□□□□ -2.51
SPG11Q96JI7 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.63□□□□□ -2.51
SPG11Q96JI7 AC023632.1-201ENST00000518463 375 ntBASIC-0.63□□□□□ -2.51
SPG11Q96JI7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.63□□□□□ -2.51
SPG11Q96JI7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.63□□□□□ -2.51
SPG11Q96JI7 MIR4306-201ENST00000583390 91 ntBASIC-0.63□□□□□ -2.51
SPG11Q96JI7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.63□□□□□ -2.51
SPG11Q96JI7 DPPA3P3-201ENST00000603842 430 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms