Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNORD14.1-201ENST00000365609 90 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 SNORA51.11-201ENST00000384442 131 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 SNORA80E-201ENST00000384744 137 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 SNORD78.2-201ENST00000391076 69 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 SNORD12B-201ENST00000410433 91 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 UQCRBP2-201ENST00000447827 297 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 AC245102.2-201ENST00000448956 180 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 AC007395.1-201ENST00000451333 677 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 AC112492.4-201ENST00000456549 352 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 AC026436.1-201ENST00000510537 270 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 AL078596.1-201ENST00000624856 447 ntBASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
CHMP4CQ96CF2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.84□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.415-201ENST00000384012 112 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 RNU6-639P-201ENST00000384074 107 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 RNU6-1145P-201ENST00000384246 107 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 MIR586-201ENST00000385035 97 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 EDDM3CP-201ENST00000415977 425 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 AC016925.1-201ENST00000458303 298 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 AC234781.5-201ENST00000508429 271 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 RNA5SP281-201ENST00000516504 135 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.812-201ENST00000610788 101 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.784-201ENST00000613803 101 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.787-201ENST00000616522 101 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.780-201ENST00000617336 101 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.801-201ENST00000619005 101 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 MTND4P1-201ENST00000457501 1466 ntBASIC2.83□□□□□ -1.96
CHMP4CQ96CF2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.422-201ENST00000384054 114 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 AC007064.1-201ENST00000412238 351 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 OOSP1P1-201ENST00000423265 274 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 PCNPP5-201ENST00000452246 481 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 AC093852.1-201ENST00000503587 266 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.721-201ENST00000517207 102 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 AC040926.1-201ENST00000530195 238 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 AL390123.1-201ENST00000603216 237 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 AC008873.1-201ENST00000625051 138 ntBASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.158-201ENST00000363651 101 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 RNU4-50P-201ENST00000364361 141 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 SNORD87-201ENST00000364849 89 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.326-201ENST00000365176 113 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 RNU6-926P-201ENST00000384075 107 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 RNU6-708P-201ENST00000384217 107 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 SNORA3.2-201ENST00000408221 125 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 RNU6-101P-201ENST00000410323 104 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 Z98742.3-201ENST00000418637 326 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 FCF1P4-201ENST00000448326 183 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 RNU6-107P-201ENST00000516643 102 ntBASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.81□□□□□ -1.96
CHMP4CQ96CF2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 Y_RNA.389-201ENST00000383924 113 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AC123900.1-201ENST00000420390 96 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 SDAD1P3-201ENST00000427380 333 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AL139109.1-201ENST00000455491 297 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 HMGN2P9-201ENST00000476875 229 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AC107222.1-201ENST00000510899 637 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AC074133.1-201ENST00000515696 183 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 SNORA40.9-201ENST00000515895 93 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AC006504.6-201ENST00000590142 199 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AL031274.2-201ENST00000599419 203 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AC124312.5-201ENST00000604451 268 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AL590808.1-201ENST00000618696 141 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 AC064859.1-201ENST00000624741 174 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 CTSLP2-204ENST00000629029 392 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 U6.92-201ENST00000636464 89 ntBASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CHMP4CQ96CF2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 SNORD115-3-201ENST00000363100 82 ntBASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 SNORD14D-201ENST00000384390 87 ntBASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 RNU4-53P-201ENST00000410828 140 ntBASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CHMP4CQ96CF2 MIR21-201ENST00000362134 72 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 U3.8-201ENST00000363675 217 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 SNORA67.2-201ENST00000384300 149 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 MIR1262-201ENST00000408276 93 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 MIR1261-201ENST00000408659 82 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms