Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU2-48P-201ENST00000410694 191 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 AC113618.1-201ENST00000416747 285 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 AC009963.1-201ENST00000417265 157 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 MTND2P23-201ENST00000422990 651 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 AL137159.1-201ENST00000452808 512 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 ATP5EP1-201ENST00000510257 156 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 RNA5SP148-201ENST00000516527 94 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 MIR5092-201ENST00000583139 88 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 AC010205.1-201ENST00000616668 449 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HPS3Q969F9 AC007336.1-201ENST00000576365 3828 ntBASIC2.75□□□□□ -1.97
HPS3Q969F9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.75□□□□□ -1.97
HPS3Q969F9 AP006437.1-201ENST00000641440 3685 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 RNA5SP68-201ENST00000363885 119 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 Y_RNA.439-201ENST00000384119 94 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 Y_RNA.458-201ENST00000384240 102 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 SRIP3-201ENST00000413200 219 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 DPH3P2-201ENST00000422618 250 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.74□□□□□ -1.97
HPS3Q969F9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.74□□□□□ -1.97
HPS3Q969F9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.74□□□□□ -1.97
HPS3Q969F9 RNU6-107P-201ENST00000516643 102 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.74□□□□□ -1.97
HPS3Q969F9 AC233702.2-202ENST00000562547 291 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.74□□□□□ -1.97
HPS3Q969F9 AL021879.1-201ENST00000611756 288 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 MIR6817-201ENST00000615588 66 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 AC008873.1-201ENST00000625051 138 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HPS3Q969F9 MIR203B-201ENST00000636080 86 ntBASIC2.74□□□□□ -1.97
HPS3Q969F9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HPS3Q969F9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.74□□□□□ -1.97
HPS3Q969F9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HPS3Q969F9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HPS3Q969F9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HPS3Q969F9 MIR6073-201ENST00000352083 89 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 RNU1-91P-201ENST00000364746 163 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 Y_RNA.459-201ENST00000384251 102 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 AC007064.1-201ENST00000412238 351 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 RPEP5-201ENST00000441137 268 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 MTND5P22-201ENST00000458380 195 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 RNU6-625P-201ENST00000459412 107 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.73□□□□□ -1.97
HPS3Q969F9 AC067942.3-201ENST00000512025 362 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 SNORA4.4-201ENST00000515921 135 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 RNU6-991P-201ENST00000516168 107 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 RNA5SP82-201ENST00000516707 92 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 CYCSP26-201ENST00000534107 320 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 AC018448.1-201ENST00000552843 316 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.73□□□□□ -1.97
HPS3Q969F9 AC026271.5-201ENST00000577873 130 ntBASIC2.73□□□□□ -1.97
HPS3Q969F9 U3.8-201ENST00000363675 217 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 RNA5SP456-201ENST00000364002 114 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 SNORA67.1-201ENST00000364749 141 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 SNORD87-201ENST00000364849 89 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 DEFA7P-201ENST00000382676 285 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 SNORA67.2-201ENST00000384300 149 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS3Q969F9 RPS12P2-201ENST00000439728 269 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC073910.1-201ENST00000445047 438 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC245102.2-201ENST00000448956 180 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC011753.1-201ENST00000451001 220 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS3Q969F9 NDUFB4P10-201ENST00000452541 359 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC016925.1-201ENST00000458303 298 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 TRBV12-1-201ENST00000479785 344 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC093259.1-201ENST00000509755 300 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
HPS3Q969F9 RNU6-408P-201ENST00000515910 100 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC131281.1-201ENST00000522984 164 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 MIR4658-201ENST00000584344 65 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC025754.2-201ENST00000606491 432 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AL357075.2-201ENST00000614906 189 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 AC011476.5-201ENST00000615594 130 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.72□□□□□ -1.97
HPS3Q969F9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HPS3Q969F9 MIR21-201ENST00000362134 72 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 RNU1-51P-201ENST00000365345 176 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 RNU6-1310P-201ENST00000384153 107 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 EDDM3CP-201ENST00000415977 425 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 HMGN2P9-201ENST00000476875 229 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.71□□□□□ -1.98
HPS3Q969F9 SNORA40.15-201ENST00000516884 107 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.71□□□□□ -1.98
HPS3Q969F9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.71□□□□□ -1.98
HPS3Q969F9 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 AC136443.5-201ENST00000603741 370 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.71□□□□□ -1.98
HPS3Q969F9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.71□□□□□ -1.98
HPS3Q969F9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HPS3Q969F9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HPS3Q969F9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms