Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR591-201ENST00000385290 95 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.37□□□□□ -1.87
BRF1Q92994 AC074198.2-201ENST00000508153 258 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BRF1Q92994 Y_RNA.703-201ENST00000516846 111 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 SCARNA11.3-201ENST00000517276 130 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.37□□□□□ -1.87
BRF1Q92994 MIR4308-201ENST00000580634 81 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BRF1Q92994 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.37□□□□□ -1.87
BRF1Q92994 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BRF1Q92994 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRF1Q92994 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
BRF1Q92994 RNU6-774P-201ENST00000363238 107 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 SNORD115-30-201ENST00000364117 82 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 RNA5SP139-201ENST00000364340 117 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 Y_RNA.243-201ENST00000364481 109 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 RNU6-923P-201ENST00000364753 107 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 MIR29B2-201ENST00000385055 81 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 RNU6-493P-201ENST00000391321 108 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.36□□□□□ -1.87
BRF1Q92994 TRIAP1P1-201ENST00000427062 225 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 Z98742.2-201ENST00000431564 187 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 RNY3P16-201ENST00000516338 101 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 HSPE1P18-201ENST00000517602 280 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 AC103810.1-201ENST00000579873 453 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 MIR4765-201ENST00000585007 77 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 AC090115.4-201ENST00000609970 188 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 AL008718.3-201ENST00000610217 321 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 AL078604.3-201ENST00000615580 211 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 AC110079.1-202ENST00000635213 138 ntBASIC3.36□□□□□ -1.87
BRF1Q92994 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRF1Q92994 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRF1Q92994 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRF1Q92994 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRF1Q92994 RNU6-486P-201ENST00000363116 107 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 Y_RNA.308-201ENST00000365043 101 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 SNORA40.19-201ENST00000390846 128 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 SNORA12-201ENST00000391162 147 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 AC140059.1-201ENST00000489238 361 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.35□□□□□ -1.87
BRF1Q92994 RNU1-117P-201ENST00000517041 158 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 AC107016.2-201ENST00000547968 190 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 AC009127.3-201ENST00000570531 403 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 MIR3133-201ENST00000583157 78 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.35□□□□□ -1.87
BRF1Q92994 AC008739.2-201ENST00000597006 317 ntBASIC3.35□□□□□ -1.87
BRF1Q92994 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BRF1Q92994 AC108206.1-201ENST00000570186 4159 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 Y_RNA.361-201ENST00000365515 120 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 DYNLT3P1-201ENST00000378574 347 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 Y_RNA.506-201ENST00000384494 102 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 RNU6-125P-201ENST00000384505 107 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 SNORA48.5-201ENST00000391143 135 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 RN7SKP51-201ENST00000410781 304 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 AL139132.1-201ENST00000431587 344 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 Y_RNA.637-201ENST00000459424 114 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 snoU13.22-201ENST00000459428 104 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.34□□□□□ -1.87
BRF1Q92994 AC083906.5-201ENST00000503722 328 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 MRPS18CP4-201ENST00000535821 231 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 RPL30P11-203ENST00000598995 310 ntBASIC3.34□□□□□ -1.87
BRF1Q92994 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.34□□□□□ -1.87
BRF1Q92994 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
BRF1Q92994 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
BRF1Q92994 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRF1Q92994 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.33□□□□□ -1.88
BRF1Q92994 AC096644.4-201ENST00000563417 2912 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 RNU6-324P-201ENST00000363957 106 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 Y_RNA.333-201ENST00000365274 102 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 RNU6-851P-201ENST00000384565 107 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 MIR586-201ENST00000385035 97 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 AL590004.2-201ENST00000404787 371 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.33□□□□□ -1.88
BRF1Q92994 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 BTF3P11-201ENST00000426582 477 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 MICF-203ENST00000432679 129 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 AC003982.1-202ENST00000469928 248 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 SNORA70.24-201ENST00000517233 118 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 AC136628.3-201ENST00000521868 290 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 AL670379.2-201ENST00000604983 252 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 UCA1.1-201ENST00000620952 75 ntBASIC3.33□□□□□ -1.88
BRF1Q92994 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
BRF1Q92994 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
BRF1Q92994 SNORA44-201ENST00000384584 132 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 AL031003.1-201ENST00000404229 172 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 RNU6-710P-201ENST00000410424 105 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 RNU6-394P-201ENST00000410735 107 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF1Q92994 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
BRF1Q92994 S100A11P2-201ENST00000467589 312 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.32□□□□□ -1.88
BRF1Q92994 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.32□□□□□ -1.88
BRF1Q92994 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms