Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 MIR520A-201ENST00000384862 85 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 MIR30A-201ENST00000385092 71 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 RN7SKP51-201ENST00000410781 304 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.28□□□□□ -2.2
PHF3Q92576 HMGN2P34-201ENST00000437647 269 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 RPS29P23-201ENST00000458635 123 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 HMGB3P17-201ENST00000504195 649 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 AC097473.1-201ENST00000508142 408 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 AP003033.1-201ENST00000527244 415 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 AP000907.4-201ENST00000604143 237 ntBASIC1.28□□□□□ -2.2
PHF3Q92576 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.28□□□□□ -2.2
PHF3Q92576 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.28□□□□□ -2.2
PHF3Q92576 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
PHF3Q92576 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.27□□□□□ -2.21
PHF3Q92576 SNORD116-4-201ENST00000384733 96 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 MIR10B-201ENST00000385011 110 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 MIR586-201ENST00000385035 97 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 SNORA48.1-201ENST00000390879 135 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AC009161.1-201ENST00000417306 376 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 MTCO3P8-201ENST00000453691 755 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RNVU1-2-201ENST00000516326 135 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RNU6-1088P-201ENST00000516850 104 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.27□□□□□ -2.21
PHF3Q92576 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.27□□□□□ -2.21
PHF3Q92576 AC084364.2-201ENST00000546924 395 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 TPRKBP2-201ENST00000565969 475 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 EIF1P4-201ENST00000572664 335 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AC022432.1-201ENST00000595739 310 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AC124303.1-201ENST00000605703 360 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AL138726.1-201ENST00000614873 333 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.27□□□□□ -2.21
PHF3Q92576 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
PHF3Q92576 Y_RNA.116-201ENST00000363292 103 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RNU6-873P-201ENST00000363833 107 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RNU6-17P-201ENST00000384245 107 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RNU6-18P-201ENST00000384527 107 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 Y_RNA.533-201ENST00000384596 114 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AC016907.1-201ENST00000419483 435 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.27□□□□□ -2.21
PHF3Q92576 snoU13.6-201ENST00000458785 104 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 RPL36AP21-201ENST00000490372 323 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PHF3Q92576 UBL5P4-201ENST00000562584 236 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 AC019193.3-201ENST00000609144 554 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 MIR6504-201ENST00000613520 61 ntBASIC1.27□□□□□ -2.21
PHF3Q92576 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PHF3Q92576 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.26□□□□□ -2.21
PHF3Q92576 MTND3P23-201ENST00000431980 347 ntBASIC1.26□□□□□ -2.21
PHF3Q92576 NFU1P2-201ENST00000448700 469 ntBASIC1.26□□□□□ -2.21
PHF3Q92576 MTND1P17-201ENST00000448961 204 ntBASIC1.26□□□□□ -2.21
PHF3Q92576 RPS29P25-201ENST00000481709 171 ntBASIC1.26□□□□□ -2.21
PHF3Q92576 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.26□□□□□ -2.21
PHF3Q92576 MIR4422-201ENST00000581938 83 ntBASIC1.26□□□□□ -2.21
PHF3Q92576 AL078604.3-201ENST00000615580 211 ntBASIC1.26□□□□□ -2.21
PHF3Q92576 AC068205.3-201ENST00000636385 468 ntBASIC1.26□□□□□ -2.21
PHF3Q92576 RNU6-1252P-201ENST00000363054 104 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 RNU6-280P-201ENST00000364145 104 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 RNU6-418P-201ENST00000384035 107 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 SNORA67.2-201ENST00000384300 149 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 Y_RNA.516-201ENST00000384541 124 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
PHF3Q92576 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 MTCO3P29-201ENST00000432119 779 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.25□□□□□ -2.21
PHF3Q92576 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.25□□□□□ -2.21
PHF3Q92576 Y_RNA.655-201ENST00000515919 96 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 RNU4-49P-201ENST00000516080 140 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.25□□□□□ -2.21
PHF3Q92576 AC093783.1-201ENST00000612976 329 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AC005562.2-201ENST00000618264 111 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AC009248.2-201ENST00000619826 254 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.25□□□□□ -2.21
PHF3Q92576 Y_RNA.212-201ENST00000364177 102 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 SNORA63D-201ENST00000364359 132 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 Y_RNA.295-201ENST00000364918 102 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 MIR515-2-201ENST00000384883 83 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 MIR515-1-201ENST00000384884 83 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
PHF3Q92576 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 RNA5SP467-201ENST00000391274 118 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AL139396.1-201ENST00000421137 167 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.25□□□□□ -2.21
PHF3Q92576 AC245047.4-201ENST00000433189 144 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 Z82188.1-201ENST00000436709 154 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AC079140.2-201ENST00000506193 142 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AC025465.3-201ENST00000510570 311 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 RNU6-273P-201ENST00000516937 96 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.25□□□□□ -2.21
PHF3Q92576 APOOP3-201ENST00000536787 586 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 RRN3P3-201ENST00000549207 578 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.25□□□□□ -2.21
PHF3Q92576 SNORD11B-201ENST00000607707 90 ntBASIC1.25□□□□□ -2.21
PHF3Q92576 AC100821.1-201ENST00000523153 2479 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms