Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC011494.1-201ENST00000596454 237 ntBASIC1.33□□□□□ -2.2
CNIH3Q8TBE1 AC009248.2-201ENST00000619826 254 ntBASIC1.33□□□□□ -2.2
CNIH3Q8TBE1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.33□□□□□ -2.2
CNIH3Q8TBE1 AC095038.3-201ENST00000634439 195 ntBASIC1.33□□□□□ -2.2
CNIH3Q8TBE1 AC100810.6-201ENST00000638068 285 ntBASIC1.33□□□□□ -2.2
CNIH3Q8TBE1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CNIH3Q8TBE1 U3.8-201ENST00000363675 217 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 RNU6-873P-201ENST00000363833 107 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 RNU6-595P-201ENST00000363944 107 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 RNU6-280P-201ENST00000364145 104 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 SNORD1A-201ENST00000364968 72 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 MIR504-201ENST00000385065 83 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 AC008134.1-201ENST00000420943 193 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 MTND4LP16-201ENST00000440828 295 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 RN7SKP210-201ENST00000459176 261 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 snoU13.27-201ENST00000459278 104 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 AL158827.2-201ENST00000602494 330 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 AC006001.4-201ENST00000622243 395 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 AL691447.3-201ENST00000635020 330 ntBASIC1.32□□□□□ -2.2
CNIH3Q8TBE1 ZNF299P-201ENST00000406845 1804 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 Y_RNA.6-201ENST00000362350 114 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RNU6-306P-201ENST00000384617 107 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RNU6-417P-201ENST00000384712 107 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 SNORD115-47-201ENST00000391226 86 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 SNORA26.9-201ENST00000391322 122 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 MIR1185-2-201ENST00000408687 86 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 AC073910.1-201ENST00000445047 438 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RPS26P55-201ENST00000471178 356 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 AC011352.1-201ENST00000512300 793 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RNU1-117P-201ENST00000517041 158 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 AC134698.4-201ENST00000523451 826 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 AC015688.6-201ENST00000577737 104 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 U6.108-201ENST00000637764 58 ntBASIC1.31□□□□□ -2.2
CNIH3Q8TBE1 AC100821.1-201ENST00000523153 2479 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 RNU6-203P-201ENST00000384038 104 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 Y_RNA.533-201ENST00000384596 114 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 RNA5SP467-201ENST00000391274 118 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 MIR548F1-201ENST00000408667 84 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 AC007677.1-201ENST00000445757 515 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 RPS26P45-201ENST00000471748 340 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 AC093303.1-201ENST00000514549 295 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 RNU7-175P-201ENST00000515915 61 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 AL590705.4-201ENST00000532209 134 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 MIR3683-201ENST00000580847 82 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 AC018638.8-201ENST00000588755 281 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 7SK.7-201ENST00000603504 247 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
CNIH3Q8TBE1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 RNU6-842P-201ENST00000384269 107 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 RNU6-541P-201ENST00000384709 110 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 MIR10B-201ENST00000385011 110 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 RNA5SP213-201ENST00000391031 106 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AL356776.1-201ENST00000406574 447 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 MIR1253-201ENST00000408273 105 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 MIR1277-201ENST00000408536 78 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 USP9YP30-201ENST00000430729 455 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 snoU13.15-201ENST00000459407 104 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 RNU6-329P-201ENST00000459618 107 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC091179.3-201ENST00000474761 144 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC116337.1-201ENST00000509680 687 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 MIR4273-201ENST00000582824 84 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 AC002553.4-201ENST00000616896 331 ntBASIC1.29□□□□□ -2.2
CNIH3Q8TBE1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 SNORD87-201ENST00000364849 89 ntBASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 SNORA4.2-201ENST00000365313 147 ntBASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 RNU6-793P-201ENST00000384233 104 ntBASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 RNU1-139P-201ENST00000391307 165 ntBASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 RPS27P1-201ENST00000450552 247 ntBASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 AP000870.1-201ENST00000472927 406 ntBASIC1.28□□□□□ -2.2
CNIH3Q8TBE1 AL163195.1-201ENST00000496941 348 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms