Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SNORA19.1-201ENST00000410656 129 ntBASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 AL021397.1-201ENST00000451806 248 ntBASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 AC078918.1-201ENST00000498515 228 ntBASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 SNORA70.16-201ENST00000516390 95 ntBASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 SNORA31.20-201ENST00000517111 133 ntBASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 AP003357.1-201ENST00000604497 148 ntBASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD1Q8NHV4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 USP8P1-201ENST00000494673 3183 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 RNU1-75P-201ENST00000347264 129 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 Y_RNA.124-201ENST00000363339 93 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 Y_RNA.333-201ENST00000365274 102 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 DYNLT3P1-201ENST00000378574 347 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 RNU6-622P-201ENST00000384272 103 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 SNORD116-13-201ENST00000384408 92 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 MIR570-201ENST00000384917 97 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 CBX3P9-201ENST00000402326 552 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 RNU2-37P-201ENST00000410695 177 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 RNU2-55P-201ENST00000411146 174 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 AC005326.1-201ENST00000429197 123 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 TOMM22P2-201ENST00000430735 237 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 MTATP8P2-201ENST00000435212 202 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 AL357552.1-201ENST00000445254 415 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 HMGN2P7-201ENST00000456186 273 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 RN7SL601P-201ENST00000471221 293 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 RNU6-344P-201ENST00000516635 111 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 SNORD11B-201ENST00000607707 90 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 MALAT1.1-201ENST00000618249 95 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD1Q8NHV4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4□□□□□ -1.77
NEDD1Q8NHV4 AL513302.2-201ENST00000562313 1842 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD1Q8NHV4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD1Q8NHV4 DLEU2_6.3-201ENST00000340052 136 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD1Q8NHV4 MIR423-201ENST00000362201 94 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 Y_RNA.91-201ENST00000363042 107 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 SNORA67.2-201ENST00000384300 149 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 MIR891A-201ENST00000401237 79 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 AL590004.2-201ENST00000404787 371 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 MIR320B2-201ENST00000408479 138 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 RHEBP3-201ENST00000411920 351 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 AC002075.2-201ENST00000425207 252 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 AC017083.1-201ENST00000428093 483 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 RPS29P31-201ENST00000446147 164 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4□□□□□ -1.77
NEDD1Q8NHV4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
NEDD1Q8NHV4 MIR4738-201ENST00000579134 87 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 AC090897.2-201ENST00000581715 130 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD1Q8NHV4 SNORD115-40-201ENST00000606510 82 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 DLEU2_6.2-201ENST00000620994 136 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 SNORD98-201ENST00000636377 67 ntBASIC4□□□□□ -1.77
NEDD1Q8NHV4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD1Q8NHV4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RNU1-73P-201ENST00000383971 164 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RNU6-1113P-201ENST00000384348 107 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 MIR325-201ENST00000385260 98 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RNA5SP496-201ENST00000391240 109 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RNA5SP120-201ENST00000410900 112 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RPL32P34-201ENST00000486380 400 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RNU1-117P-201ENST00000517041 158 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RNU6-365P-201ENST00000517113 106 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 RNU1-104P-201ENST00000517280 175 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 AC026421.1-201ENST00000519101 163 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 FTX_3.1-201ENST00000610451 147 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 AC018692.3-201ENST00000623929 123 ntBASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD1Q8NHV4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 AC073346.2-201ENST00000624724 2058 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 SNORA63.5-201ENST00000363548 123 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 AP002088.1-201ENST00000382740 395 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 Y_RNA.593-201ENST00000410292 98 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 AC008134.1-201ENST00000420943 193 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms