Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 RNU6-438P-201ENST00000365561 103 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC117470.1-201ENST00000381974 330 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 SNORD14D-201ENST00000384390 87 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 Y_RNA.485-201ENST00000384395 102 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.55□□□□□ -2
CCDC33Q8N5R6 NDUFB4P10-201ENST00000452541 359 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC093852.1-201ENST00000503587 266 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC087441.2-201ENST00000529141 262 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AL357075.2-201ENST00000614906 189 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
CCDC33Q8N5R6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.55□□□□□ -2
CCDC33Q8N5R6 AC091812.1-201ENST00000432235 1948 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CCDC33Q8N5R6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC33Q8N5R6 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 RNU6-708P-201ENST00000384217 107 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 SNORD12B-201ENST00000410433 91 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.54□□□□□ -2
CCDC33Q8N5R6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.54□□□□□ -2
CCDC33Q8N5R6 snoU13.26-201ENST00000459452 105 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.54□□□□□ -2
CCDC33Q8N5R6 RNU1-117P-201ENST00000517041 158 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 AP003072.1-201ENST00000531740 145 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 AK6P2-201ENST00000549020 471 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 AL442663.2-201ENST00000554385 511 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 HSBP1P1-201ENST00000555205 166 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.54□□□□□ -2
CCDC33Q8N5R6 MIR4753-201ENST00000585119 83 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 AL078596.1-201ENST00000624856 447 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.54□□□□□ -2
CCDC33Q8N5R6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.54□□□□□ -2
CCDC33Q8N5R6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC33Q8N5R6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CCDC33Q8N5R6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC33Q8N5R6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 Y_RNA.326-201ENST00000365176 113 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 SNORA33.2-201ENST00000365413 134 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 Y_RNA.526-201ENST00000384572 110 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 Y_RNA.645-201ENST00000391229 102 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 MRPL42P3-201ENST00000401492 326 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.53□□□□□ -2
CCDC33Q8N5R6 MTCO1P44-201ENST00000441935 243 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 AC010531.2-201ENST00000465012 153 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 AC114982.1-201ENST00000469402 321 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 RPS29P21-201ENST00000496272 170 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 AC074133.1-201ENST00000515696 183 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 RNU6-1012P-201ENST00000516606 109 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.53□□□□□ -2
CCDC33Q8N5R6 AL031274.2-201ENST00000599419 203 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 AC016925.2-201ENST00000605108 242 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 MIR7843-201ENST00000622274 79 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 U6.92-201ENST00000636464 89 ntBASIC2.53□□□□□ -2
CCDC33Q8N5R6 U3.8-201ENST00000363675 217 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 SNORA3A-201ENST00000364113 130 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 SNORD87-201ENST00000364849 89 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 SNORD78.2-201ENST00000391076 69 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 SDAD1P3-201ENST00000427380 333 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 UQCRBP2-201ENST00000447827 297 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 AC245102.2-201ENST00000448956 180 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 AC010469.2-201ENST00000496412 480 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 SNORA40.9-201ENST00000515895 93 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 RNU2-34P-201ENST00000516534 121 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 AC009127.3-201ENST00000570531 403 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC33Q8N5R6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AC009487.4-201ENST00000624969 3585 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 SNORA63-201ENST00000363450 132 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 Y_RNA.158-201ENST00000363651 101 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 RNU6-975P-201ENST00000384296 105 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 MIR29C-201ENST00000385231 88 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 MRPL35P1-201ENST00000404272 572 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 ELOCP21-201ENST00000412558 336 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AL357134.1-201ENST00000445848 426 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 FCF1P4-201ENST00000448326 183 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 PCNPP5-201ENST00000452246 481 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AC040926.1-201ENST00000530195 238 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AC104695.3-201ENST00000604052 296 ntBASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC33Q8N5R6 LINC02555-201ENST00000563933 1951 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms