Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MIR1273D-201ENST00000577266 86 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.12□□□□□ -2.07
BEST3Q8N1M1 MIR6715A-201ENST00000615929 79 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC005592.1-201ENST00000566527 1640 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MIR21-201ENST00000362134 72 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.148-201ENST00000363557 117 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 AC117470.1-201ENST00000381974 330 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 RNU6-318P-201ENST00000384283 103 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 RNY3P4-201ENST00000384428 101 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MIR586-201ENST00000385035 97 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MIR1283-1-201ENST00000408494 87 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.595-201ENST00000410403 105 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.11□□□□□ -2.07
BEST3Q8N1M1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
BEST3Q8N1M1 IFNA11P-201ENST00000446352 526 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 AC245102.2-201ENST00000448956 180 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 AC016925.1-201ENST00000458303 298 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 HSBP1P1-201ENST00000555205 166 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MYL12BP1-201ENST00000569826 507 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MIR5188-201ENST00000583467 113 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MIR4753-201ENST00000585119 83 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 AC104984.5-201ENST00000586878 94 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MZT1P2-201ENST00000604387 248 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 SNORD58B-201ENST00000607313 66 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 AC068205.3-201ENST00000636385 468 ntBASIC2.11□□□□□ -2.07
BEST3Q8N1M1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.11□□□□□ -2.07
BEST3Q8N1M1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.27-201ENST00000362540 103 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 RNU6-545P-201ENST00000362681 104 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 RNA5SP361-201ENST00000362686 118 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.80-201ENST00000362996 102 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.132-201ENST00000363421 102 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 SNORA67.2-201ENST00000384300 149 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.526-201ENST00000384572 110 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 AC123900.1-201ENST00000420390 96 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 AC114982.1-201ENST00000469402 321 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 AC093852.1-201ENST00000503587 266 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 RNU1-104P-201ENST00000517280 175 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 AC008873.1-201ENST00000625051 138 ntBASIC2.1□□□□□ -2.07
BEST3Q8N1M1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
BEST3Q8N1M1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 ZNF72P-201ENST00000425869 1908 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 SNORA63-201ENST00000363450 132 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 RNU6-727P-201ENST00000363592 107 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 SNORA67.1-201ENST00000364749 141 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 RNU1-52P-201ENST00000384190 164 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.485-201ENST00000384395 102 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 AC074290.1-201ENST00000448883 135 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 PCNPP5-201ENST00000452246 481 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 AC112492.4-201ENST00000456549 352 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 RNU1-117P-201ENST00000517041 158 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 RPS29P30-201ENST00000600975 111 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 AC025754.2-201ENST00000606491 432 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 AL078596.1-201ENST00000624856 447 ntBASIC2.09□□□□□ -2.07
BEST3Q8N1M1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST3Q8N1M1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.09□□□□□ -2.08
BEST3Q8N1M1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
BEST3Q8N1M1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.216-201ENST00000364205 93 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 SNORD14.1-201ENST00000365609 90 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.424-201ENST00000384063 103 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 MRPL42P3-201ENST00000401492 326 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 SNORD12B-201ENST00000410433 91 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 RNA5SP504-201ENST00000410676 117 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 NDUFB4P10-201ENST00000452541 359 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 snoU13.26-201ENST00000459452 105 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
BEST3Q8N1M1 AC074133.1-201ENST00000515696 183 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.08□□□□□ -2.08
BEST3Q8N1M1 AC233702.2-202ENST00000562547 291 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 AC016925.2-201ENST00000605108 242 ntBASIC2.08□□□□□ -2.08
BEST3Q8N1M1 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms