Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 HMGN2P9-201ENST00000476875 229 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AC103851.1-201ENST00000506833 274 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 PRDX4P1-201ENST00000507189 574 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AC097473.1-201ENST00000508142 408 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 MRPS17P9-201ENST00000511924 393 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-344P-201ENST00000516635 111 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.708-201ENST00000516950 96 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 RNU1-117P-201ENST00000517041 158 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AC134698.4-201ENST00000523451 826 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AC022306.2-201ENST00000617563 647 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 AL353997.5-201ENST00000618886 171 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-975P-201ENST00000384296 105 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 USMG5P1-201ENST00000425964 177 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 AC074290.1-201ENST00000448883 135 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 AC016717.1-201ENST00000448918 286 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 MTND3P10-201ENST00000450967 341 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 AP000870.1-201ENST00000472927 406 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-948P-201ENST00000516374 107 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 RNU2-34P-201ENST00000516534 121 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.706-201ENST00000516933 99 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-856P-201ENST00000516959 98 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 UBL5P4-201ENST00000562584 236 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 MIR3124-201ENST00000582636 67 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 MIR4769-201ENST00000584126 77 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 AC009229.3-201ENST00000608056 282 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 AC099654.14-201ENST00000638599 341 ntBASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-280P-201ENST00000364145 104 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 SNORD81.2-201ENST00000365153 76 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-159P-201ENST00000391080 106 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 SNORA17.3-201ENST00000391159 129 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 AL033519.2-201ENST00000403958 392 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 RPL7P42-201ENST00000481005 679 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.691-201ENST00000516611 103 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 MIR5094-201ENST00000578766 85 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 AL355802.3-201ENST00000607571 545 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 AC100812.1-201ENST00000607622 580 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 SNORD11B-201ENST00000607707 90 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 PISRT1.1-201ENST00000616930 107 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 AL078596.1-201ENST00000624856 447 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 AC008873.1-201ENST00000625051 138 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 AC099654.5-201ENST00000636479 350 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 TPTEP1-208ENST00000636884 213 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 MTND4P12-201ENST00000498999 1377 ntBASIC1.47□□□□□ -2.17
C9orf40Q8IXQ3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
C9orf40Q8IXQ3 RNU1-62P-201ENST00000362599 164 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-1283P-201ENST00000365314 105 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 SNORA67.2-201ENST00000384300 149 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-482P-201ENST00000391068 107 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AL356432.1-201ENST00000405809 419 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNA5SP100-201ENST00000410903 110 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNA5SP59-201ENST00000410922 110 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC138393.2-201ENST00000414742 246 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 NCOR1P3-201ENST00000420479 303 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC060773.1-201ENST00000421698 310 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 MTND3P23-201ENST00000431980 347 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC098614.3-201ENST00000438957 440 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-498P-201ENST00000459468 107 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNU7-57P-201ENST00000459540 60 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 MTND4P17-201ENST00000470444 350 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 SNORA20.3-201ENST00000516880 132 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 MIR4713-201ENST00000582691 75 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC005014.2-201ENST00000607795 599 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC005296.1-201ENST00000616145 209 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
C9orf40Q8IXQ3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-862P-201ENST00000362804 105 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 RNU5F-3P-201ENST00000363767 117 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms