Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC005786.1-201ENST00000588553 154 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.96□□□□□ -2.1
LDB1Q86U70 AC010999.1-201ENST00000611856 324 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.96□□□□□ -2.1
LDB1Q86U70 Y_RNA.804-201ENST00000615262 101 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 AL008636.1-201ENST00000625038 1018 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 MTND4LP32-201ENST00000636111 270 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 AC068205.3-201ENST00000636385 468 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LDB1Q86U70 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 RNU6-99P-201ENST00000364721 107 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 RNU6-281P-201ENST00000384212 103 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 SNORD116-29-201ENST00000384516 83 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 RNU6-1235P-201ENST00000384559 107 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 Y_RNA.577-201ENST00000384794 101 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 MIR17-201ENST00000385012 84 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 RNY4P36-201ENST00000391116 96 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 MTCO2P27-201ENST00000420740 428 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 ELOCP24-201ENST00000456370 334 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 RNU6-498P-201ENST00000459468 107 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 RNU6-856P-201ENST00000516959 98 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 Y_RNA.718-201ENST00000517110 102 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 MIR4287-201ENST00000579398 78 ntBASIC1.95□□□□□ -2.1
LDB1Q86U70 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.95□□□□□ -2.1
LDB1Q86U70 RNU6-874P-201ENST00000362390 105 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 MT-TD-201ENST00000387419 68 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 RNA5SP213-201ENST00000391031 106 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 RNA5SP504-201ENST00000410676 117 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 RNA5SP501-201ENST00000410990 112 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 EIF1P2-201ENST00000428233 350 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.94□□□□□ -2.1
LDB1Q86U70 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.94□□□□□ -2.1
LDB1Q86U70 UBE2V1P7-201ENST00000446395 340 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 Y_RNA.632-201ENST00000459189 102 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 AC091179.3-201ENST00000474761 144 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 RNU6-470P-201ENST00000515954 104 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 SUMO2P18-201ENST00000518873 252 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.94□□□□□ -2.1
LDB1Q86U70 AC116312.1-201ENST00000606841 314 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 AC083806.3-201ENST00000614016 455 ntBASIC1.94□□□□□ -2.1
LDB1Q86U70 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LDB1Q86U70 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LDB1Q86U70 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
LDB1Q86U70 AC245060.5-201ENST00000610778 3293 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
LDB1Q86U70 AL079342.1-201ENST00000401460 267 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.93□□□□□ -2.1
LDB1Q86U70 AC236972.2-201ENST00000434979 310 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LDB1Q86U70 AC092473.1-201ENST00000441098 221 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 AC016717.1-201ENST00000448918 286 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 NDUFB4P10-201ENST00000452541 359 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.93□□□□□ -2.1
LDB1Q86U70 MIR2053-201ENST00000459295 91 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 RNU7-57P-201ENST00000459540 60 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 MTND3P22-201ENST00000510932 243 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 RNU6-120P-201ENST00000516077 103 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 Y_RNA.683-201ENST00000516508 93 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 AC093023.1-201ENST00000547375 507 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LDB1Q86U70 LARP7P1-201ENST00000605576 316 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 MIR1244-1-201ENST00000612829 85 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 MIR1244-3-201ENST00000635744 85 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 MIR1244-2-201ENST00000636449 85 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 MIR1244-4-202ENST00000636813 85 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 AC112487.2-201ENST00000637950 304 ntBASIC1.93□□□□□ -2.1
LDB1Q86U70 Y_RNA.67-201ENST00000362870 100 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 RNU6-727P-201ENST00000363592 107 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 Y_RNA.358-201ENST00000365491 99 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 Y_RNA.557-201ENST00000384680 107 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 MIR625-201ENST00000385047 85 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LDB1Q86U70 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 MIR1261-201ENST00000408659 82 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 RNU6-1156P-201ENST00000410365 100 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.92□□□□□ -2.1
LDB1Q86U70 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 ATP5J2P3-201ENST00000451550 258 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.92□□□□□ -2.1
LDB1Q86U70 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.92□□□□□ -2.1
LDB1Q86U70 MZT1P2-201ENST00000604387 248 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 AC084781.2-201ENST00000615568 161 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 AC126177.8-201ENST00000618339 1015 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.92□□□□□ -2.1
LDB1Q86U70 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.92□□□□□ -2.1
LDB1Q86U70 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LDB1Q86U70 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LDB1Q86U70 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LDB1Q86U70 MTND5P35-201ENST00000557537 1720 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.91□□□□□ -2.1
LDB1Q86U70 RNU6-490P-201ENST00000362985 107 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 U3.8-201ENST00000363675 217 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 SNORD87-201ENST00000364849 89 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 Y_RNA.415-201ENST00000384012 112 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms