Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-440P-201ENST00000390882 105 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MIR300-201ENST00000401138 83 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 AL590004.2-201ENST00000404787 371 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RNA5SP239-201ENST00000410218 129 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-57P-201ENST00000411348 103 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RPS29P7-201ENST00000439662 171 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RPL39P34-201ENST00000477141 156 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 AC023141.12-201ENST00000512399 199 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-970P-201ENST00000516312 107 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RNA5SP281-201ENST00000516504 135 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-365P-201ENST00000517113 106 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 AC025647.1-201ENST00000517879 253 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 AC107934.2-201ENST00000518653 310 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MIR4444-1-201ENST00000581696 74 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MIR4444-2-201ENST00000584390 74 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MIR4753-201ENST00000585119 83 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MIR6075-201ENST00000620782 95 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 AL035470.1-201ENST00000622571 220 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MIR1245B-201ENST00000636115 69 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 AC093908.1-201ENST00000623125 8092 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNU1-18P-201ENST00000363062 164 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-1209P-201ENST00000363655 107 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-1138P-201ENST00000365359 106 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-975P-201ENST00000384296 105 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 MIR562-201ENST00000384894 95 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNA5SP354-201ENST00000391247 136 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNU2-32P-201ENST00000411193 191 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNU7-14P-201ENST00000459331 62 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 MIR5685-201ENST00000579080 79 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 MIR4662B-201ENST00000579498 81 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 MIR3129-201ENST00000581095 76 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 AC110741.2-201ENST00000605278 268 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-94P-201ENST00000607728 107 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 AC002064.3-201ENST00000623448 346 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 AC010680.1-201ENST00000590024 3590 ntBASIC3.88□□□□□ -1.79
LYSMD3Q7Z3D4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 SNORA1-201ENST00000384107 130 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-1113P-201ENST00000384348 107 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 Y_RNA.544-201ENST00000384650 113 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 MIR199A2-201ENST00000385289 110 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 MIR670-201ENST00000390142 98 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 RNA5SP171-201ENST00000391071 115 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 HMGN2P8-201ENST00000391458 268 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 AC016717.1-201ENST00000448918 286 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 COX6CP6-201ENST00000490840 228 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 RN7SL323P-201ENST00000494712 295 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 OR9P1P-201ENST00000496431 281 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-126P-201ENST00000516685 103 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.87□□□□□ -1.79
LYSMD3Q7Z3D4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 SNORA63.5-201ENST00000363548 123 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 Y_RNA.323-201ENST00000365157 109 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-750P-201ENST00000390946 107 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 RPL36AP48-201ENST00000485521 314 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 ATP5EP1-201ENST00000510257 156 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 MIR449C-201ENST00000516047 92 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 CYCSP30-201ENST00000546447 172 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 AC079598.5-201ENST00000547460 117 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 AC008739.3-201ENST00000603262 127 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 U7.8-201ENST00000619968 63 ntBASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LYSMD3Q7Z3D4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 Y_RNA.49-201ENST00000362714 112 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-573P-201ENST00000383938 106 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 MIR30B-201ENST00000384850 88 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 AC007064.1-201ENST00000412238 351 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 RPS4XP11-201ENST00000446897 772 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 AC022695.1-201ENST00000522089 237 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 AC096577.2-201ENST00000611455 153 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 AL442128.1-201ENST00000615151 90 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms