Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 MIR449C-201ENST00000516047 92 ntBASIC2.59□□□□□ -1.99
VSTM1Q6UX27 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
VSTM1Q6UX27 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.59□□□□□ -1.99
VSTM1Q6UX27 MIR3199-1-201ENST00000582434 88 ntBASIC2.59□□□□□ -1.99
VSTM1Q6UX27 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -2
VSTM1Q6UX27 AC016717.2-201ENST00000609089 5141 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
VSTM1Q6UX27 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
VSTM1Q6UX27 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.58□□□□□ -2
VSTM1Q6UX27 RNU6-486P-201ENST00000363116 107 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 SNORD113-8-201ENST00000363497 74 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 Y_RNA.179-201ENST00000363844 90 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 Y_RNA.286-201ENST00000364813 102 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 RNU6-20P-201ENST00000384106 107 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 RNU6-301P-201ENST00000384277 107 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 Y_RNA.477-201ENST00000384352 108 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 Y_RNA.541-201ENST00000384640 113 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
VSTM1Q6UX27 RNU6-1203P-201ENST00000410703 110 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 RNA5SP508-201ENST00000411327 119 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 AC004386.2-201ENST00000441858 148 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 RNU6-1132P-201ENST00000459214 107 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 RNA5SP24-201ENST00000516478 95 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 Y_RNA.683-201ENST00000516508 93 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 AP001282.2-201ENST00000616149 309 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 AL590808.1-201ENST00000618696 141 ntBASIC2.58□□□□□ -2
VSTM1Q6UX27 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.58□□□□□ -2
VSTM1Q6UX27 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.58□□□□□ -2
VSTM1Q6UX27 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VSTM1Q6UX27 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VSTM1Q6UX27 RNU6-626P-201ENST00000363354 107 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 RNU6-944P-201ENST00000364023 107 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 Y_RNA.415-201ENST00000384012 112 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 Y_RNA.447-201ENST00000384184 113 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 RNU6-793P-201ENST00000384233 104 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 RNU6-1274P-201ENST00000384557 107 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 AL033519.2-201ENST00000403958 392 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 Y_RNA.595-201ENST00000410403 105 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 Y_RNA.618-201ENST00000410949 107 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.57□□□□□ -2
VSTM1Q6UX27 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 RN7SL636P-201ENST00000497504 294 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 AC234781.5-201ENST00000508429 271 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 AC107222.1-201ENST00000510899 637 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 RNU6-966P-201ENST00000516479 104 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.57□□□□□ -2
VSTM1Q6UX27 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
VSTM1Q6UX27 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.57□□□□□ -2
VSTM1Q6UX27 AL670379.2-201ENST00000604983 252 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 AC005562.2-201ENST00000618264 111 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
VSTM1Q6UX27 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
VSTM1Q6UX27 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.56□□□□□ -2
VSTM1Q6UX27 Y_RNA.237-201ENST00000364439 102 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 SNORA68.1-201ENST00000364537 132 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 SNORD87-201ENST00000364849 89 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 Y_RNA.597-201ENST00000410463 100 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 ELOCP21-201ENST00000412558 336 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 UQCRBP2-201ENST00000447827 297 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 RPL23AP3-201ENST00000453844 468 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 RN7SKP40-201ENST00000517211 242 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 DEFB108E-201ENST00000524692 240 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 AP002001.1-203ENST00000534002 267 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.56□□□□□ -2
VSTM1Q6UX27 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.56□□□□□ -2
VSTM1Q6UX27 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.56□□□□□ -2
VSTM1Q6UX27 MIR3128-201ENST00000581957 66 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 MIR5006-201ENST00000583027 110 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 AC012433.1-201ENST00000588916 398 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 SNRPGP20-201ENST00000604477 205 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 MTND5P6-201ENST00000422338 1798 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.56□□□□□ -2
VSTM1Q6UX27 AC080128.1-201ENST00000474389 1917 ntBASIC2.56□□□□□ -2
VSTM1Q6UX27 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.56□□□□□ -2
VSTM1Q6UX27 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
VSTM1Q6UX27 Y_RNA.14-201ENST00000362415 103 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 RNU6-379P-201ENST00000363813 104 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 SNORD32B-201ENST00000364460 84 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 RNU6-245P-201ENST00000384020 107 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
VSTM1Q6UX27 RNA5SP504-201ENST00000410676 117 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.55□□□□□ -2
VSTM1Q6UX27 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
VSTM1Q6UX27 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.55□□□□□ -2
VSTM1Q6UX27 AC007395.1-201ENST00000451333 677 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 HSPE1P25-201ENST00000455484 251 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.55□□□□□ -2
VSTM1Q6UX27 RNU6-496P-201ENST00000516145 99 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 RNU2-44P-201ENST00000516795 194 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 RNU1-117P-201ENST00000517041 158 ntBASIC2.55□□□□□ -2
VSTM1Q6UX27 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.55□□□□□ -2
VSTM1Q6UX27 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.55□□□□□ -2
VSTM1Q6UX27 AC018448.1-201ENST00000552843 316 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms