Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC104563.1-201ENST00000476147 376 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 RPL17P19-201ENST00000489069 552 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 RNU6-914P-201ENST00000516749 109 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AP001328.1-201ENST00000528550 176 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AC023538.1-201ENST00000534576 736 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AC023157.2-201ENST00000540596 141 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 LRRC34P1-201ENST00000542742 915 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 BCRP9-201ENST00000605312 388 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AL354696.1-201ENST00000614652 497 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 RNU6-212P-201ENST00000362642 104 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-853P-201ENST00000364306 107 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 SNORA1.1-201ENST00000364671 133 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 SNORD51.1-201ENST00000365405 77 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-946P-201ENST00000383878 107 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC005042.3-201ENST00000453230 174 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC093899.1-201ENST00000457984 376 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 TPT1P7-201ENST00000458300 517 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC113347.3-201ENST00000509113 148 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC021146.9-201ENST00000512503 156 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC078795.3-201ENST00000602913 472 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 CDR1-202ENST00000625883 1485 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 MIR1-1-201ENST00000362147 71 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-161P-201ENST00000363051 106 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-119P-201ENST00000364882 107 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-125P-201ENST00000384505 107 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 MIR1302-7-201ENST00000408841 72 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC006026.2-201ENST00000457376 180 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC091885.1-201ENST00000506658 268 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RN7SKP164-201ENST00000516138 266 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 SNORA40.12-201ENST00000516329 111 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU1-142P-201ENST00000516682 145 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 AC093023.1-201ENST00000547375 507 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 MIR548AO-201ENST00000579992 96 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 MIR4432-201ENST00000581823 84 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 Z99289.3-201ENST00000605586 594 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 MIR1264-201ENST00000616374 69 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.36□□□□□ -2.47
CSPG4Q6UVK1 RNU6-97P-201ENST00000363387 104 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 SNORA32.2-201ENST00000384049 122 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 SNORA8.2-201ENST00000384372 139 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 MTND3P20-201ENST00000407663 186 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 RNU4-30P-201ENST00000410245 143 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 RNA5SP201-201ENST00000410316 124 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AL512326.2-201ENST00000426359 151 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 RPS24P1-201ENST00000438550 371 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 MTND4P19-201ENST00000446659 478 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AL133217.1-201ENST00000450980 425 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 RNU2-60P-201ENST00000517290 128 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 MIR3146-201ENST00000580367 79 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AL359547.2-201ENST00000615810 418 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 MIR6738-201ENST00000619620 64 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AC231657.1-201ENST00000624313 397 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AC120349.2-201ENST00000625002 298 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 MIR526A1-201ENST00000384897 85 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 HSFY7P-201ENST00000432672 318 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 HSFY8P-201ENST00000437934 318 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 DEFB108A-201ENST00000530110 222 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AC110760.3-201ENST00000598794 467 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AC007684.1-201ENST00000609671 477 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 AC024940.5-201ENST00000622889 474 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 MIR6079-201ENST00000635807 62 ntBASIC-0.37□□□□□ -2.47
CSPG4Q6UVK1 SNORD32A-201ENST00000364805 84 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-744P-201ENST00000365557 107 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-650P-201ENST00000365658 111 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MIR520C-201ENST00000385005 87 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MED13P1-201ENST00000428342 171 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 TIMM9P3-201ENST00000428659 274 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 TPTE2P1-204ENST00000435256 593 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC007327.1-201ENST00000447461 264 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MIR5006-201ENST00000583027 110 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MIR548AD-201ENST00000584780 82 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MIR4753-201ENST00000585119 83 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms