Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL365496.1-201ENST00000426885 215 ntBASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-436P-201ENST00000516171 114 ntBASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 AL133393.1-201ENST00000603277 287 ntBASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 uc_338.14-201ENST00000613162 166 ntBASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 MTND1P7-201ENST00000632801 297 ntBASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 AL359854.1-201ENST00000614203 1594 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 AC062016.1-201ENST00000355719 319 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNU4-82P-201ENST00000362443 140 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNA5SP383-201ENST00000362934 120 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-704P-201ENST00000364162 103 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-454P-201ENST00000364292 107 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 SNORD116-18-201ENST00000383961 92 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 MIR548I2-201ENST00000408348 149 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNU2-2P-201ENST00000410396 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 ARF4P2-201ENST00000430209 526 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNA5SP217-201ENST00000515959 91 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-711P-201ENST00000517255 106 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 DEFB131C-201ENST00000528817 165 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNU2-4P-201ENST00000606190 192 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.15-201ENST00000611544 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.16-201ENST00000613119 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.12-201ENST00000613778 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.9-201ENST00000615427 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.11-201ENST00000616345 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.2-201ENST00000616535 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.3-201ENST00000617785 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.19-201ENST00000618602 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 RNU2-1-201ENST00000618664 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.6-201ENST00000619225 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.5-201ENST00000619465 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 U2.10-201ENST00000620268 191 ntBASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF40BQ6NWY9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-763P-201ENST00000390865 106 ntBASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 AL031003.1-201ENST00000404229 172 ntBASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 RNA5SP184-201ENST00000411071 108 ntBASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-1135P-201ENST00000411083 103 ntBASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 RPS20P10-201ENST00000451209 253 ntBASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF40BQ6NWY9 AC093908.1-201ENST00000623125 8092 ntBASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 Y_RNA.182-201ENST00000363880 111 ntBASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 Y_RNA.238-201ENST00000364441 102 ntBASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 Y_RNA.272-201ENST00000364696 102 ntBASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 RNA5SP354-201ENST00000391247 136 ntBASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-710P-201ENST00000410424 105 ntBASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 MIR548AI-201ENST00000579940 88 ntBASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.78□□□□□ -1.8
PRPF40BQ6NWY9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 RNU6-805P-201ENST00000365643 106 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 Y_RNA.441-201ENST00000384123 112 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 RPL32P35-201ENST00000415214 394 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 Z98742.2-201ENST00000431564 187 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 AL109933.2-201ENST00000452651 260 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 Y_RNA.637-201ENST00000459424 114 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 SRIP1-201ENST00000489235 288 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 AC079598.5-201ENST00000547460 117 ntBASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF40BQ6NWY9 U3.8-201ENST00000363675 217 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 SNORD115-30-201ENST00000364117 82 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 SNORA14A-201ENST00000364773 135 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 Y_RNA.287-201ENST00000364853 94 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 Y_RNA.291-201ENST00000364886 113 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 SNORD50.2-201ENST00000365465 70 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 Y_RNA.357-201ENST00000365487 109 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 SNORA12-201ENST00000391162 147 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 RNA5SP293-201ENST00000410527 113 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 RNA5SP504-201ENST00000410676 117 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 RNU5E-9P-201ENST00000411164 104 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 RPS27AP9-201ENST00000477681 438 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 AC083906.5-201ENST00000503722 328 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 AC093331.1-201ENST00000521474 169 ntBASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.76□□□□□ -1.81
PRPF40BQ6NWY9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF40BQ6NWY9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF40BQ6NWY9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF40BQ6NWY9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms