Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.58□□□□□ -2
PPP4R4Q6NUP7 HSBP1P1-201ENST00000555205 166 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.58□□□□□ -2
PPP4R4Q6NUP7 MIR4680-201ENST00000580906 66 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 MIR4719-201ENST00000585233 84 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 AC011476.5-201ENST00000615594 130 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PPP4R4Q6NUP7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
PPP4R4Q6NUP7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PPP4R4Q6NUP7 XGY1-201ENST00000381172 446 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 SNORA6-201ENST00000384033 151 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 RNU6-926P-201ENST00000384075 107 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 RNU6-1011P-201ENST00000384668 107 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 SDAD1P3-201ENST00000427380 333 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 PCNPP5-201ENST00000452246 481 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC093852.1-201ENST00000503587 266 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.57□□□□□ -2
PPP4R4Q6NUP7 RNU2-34P-201ENST00000516534 121 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 RNU6-856P-201ENST00000516959 98 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 RNA5SP402-201ENST00000517148 110 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC040926.1-201ENST00000530195 238 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC018448.1-201ENST00000552843 316 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC055872.1-201ENST00000570978 278 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC016925.2-201ENST00000605108 242 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 PART1_1.1-201ENST00000611761 217 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 AC040896.1-201ENST00000613819 479 ntBASIC2.57□□□□□ -2
PPP4R4Q6NUP7 ZNF702P-202ENST00000434269 1966 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AL596028.1-201ENST00000326971 197 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 SNORA80A-201ENST00000363922 136 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 RNU6-823P-201ENST00000391042 103 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 SNORD78.2-201ENST00000391076 69 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 MTCO3P19-201ENST00000415864 321 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AC016909.1-201ENST00000415916 166 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 RPL23AP3-201ENST00000453844 468 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 RNU6-498P-201ENST00000459468 107 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 RNU7-57P-201ENST00000459540 60 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AC114982.1-201ENST00000469402 321 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AC074133.1-201ENST00000515696 183 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 CYCSP23-201ENST00000519781 313 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AP005660.1-201ENST00000522972 293 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AL109918.3-201ENST00000603072 338 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AL021879.1-201ENST00000611756 288 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AC240442.1-201ENST00000616055 283 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.56□□□□□ -2
PPP4R4Q6NUP7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PPP4R4Q6NUP7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.56□□□□□ -2
PPP4R4Q6NUP7 AC008555.8-201ENST00000623602 2168 ntBASIC2.56□□□□□ -2
PPP4R4Q6NUP7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PPP4R4Q6NUP7 MIR410-201ENST00000362222 80 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 Y_RNA.158-201ENST00000363651 101 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 Y_RNA.202-201ENST00000364083 110 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 RNU6-450P-201ENST00000364654 107 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 Y_RNA.458-201ENST00000384240 102 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 MIR17-201ENST00000385012 84 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 MRPL35P1-201ENST00000404272 572 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 AL512604.1-201ENST00000404812 257 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 MIR1185-2-201ENST00000408687 86 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 RNU6-130P-201ENST00000411112 103 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 RAB28P5-201ENST00000427490 651 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.55□□□□□ -2
PPP4R4Q6NUP7 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 FCF1P4-201ENST00000448326 183 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.55□□□□□ -2
PPP4R4Q6NUP7 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 MIR4659A-201ENST00000580269 81 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 AC010205.1-201ENST00000616668 449 ntBASIC2.55□□□□□ -2
PPP4R4Q6NUP7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.55□□□□□ -2
PPP4R4Q6NUP7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.55□□□□□ -2
PPP4R4Q6NUP7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.54□□□□□ -2
PPP4R4Q6NUP7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PPP4R4Q6NUP7 SNORA51.11-201ENST00000384442 131 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
PPP4R4Q6NUP7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 RPEP5-201ENST00000441137 268 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 RNU6-625P-201ENST00000459412 107 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 RNU6-221P-201ENST00000459541 99 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 RNU6-408P-201ENST00000515910 100 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 RNU6-948P-201ENST00000516374 107 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 AC023442.1-201ENST00000531247 422 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 AC005786.1-201ENST00000588553 154 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 AL162373.1-201ENST00000620433 407 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 snoZ196.1-201ENST00000625269 89 ntBASIC2.54□□□□□ -2
PPP4R4Q6NUP7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PPP4R4Q6NUP7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.54□□□□□ -2
PPP4R4Q6NUP7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
PPP4R4Q6NUP7 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
PPP4R4Q6NUP7 SNORD14.1-201ENST00000365609 90 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms