Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SNORA18.1-201ENST00000363418 128 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 SNORD14C-201ENST00000365382 88 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 SNORD126-201ENST00000459475 77 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 AC025647.1-201ENST00000517879 253 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 AC005730.3-201ENST00000583067 366 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 MIR8064-201ENST00000612863 90 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 AC078880.5-201ENST00000617845 421 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 AL356596.1-201ENST00000624230 379 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 RNU6-621P-201ENST00000364752 109 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 SNORA36A-201ENST00000384221 132 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 HSFY5P-201ENST00000453726 309 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 MTCO3P27-201ENST00000514397 196 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 RNU7-99P-201ENST00000516271 62 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 RNA5SP268-201ENST00000516828 124 ntBASIC-0.69□□□□□ -2.52
CCDC58Q4VC31 RNU6-462P-201ENST00000362659 105 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 SNORD114-12-201ENST00000365400 75 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 SNORA2B-201ENST00000384583 137 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 RNU2-59P-201ENST00000410482 191 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 AC012306.1-201ENST00000423267 114 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 SNAP23P1-201ENST00000433229 246 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 AC114811.1-201ENST00000507207 168 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 AK6P2-201ENST00000549020 471 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 AL139286.2-201ENST00000606838 396 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 AC245297.2-201ENST00000610119 565 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 AL445523.1-201ENST00000451184 1362 ntBASIC-0.7□□□□□ -2.52
CCDC58Q4VC31 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 MIR329-2-201ENST00000385029 84 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 RNU6-607P-201ENST00000411283 108 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 AC013470.1-201ENST00000453438 462 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 RNU7-57P-201ENST00000459540 60 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 AC008628.2-201ENST00000502605 298 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 MTND3P25-201ENST00000509243 135 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 AC109479.2-201ENST00000517842 174 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 AP002802.2-201ENST00000605877 235 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 AC108747.1-201ENST00000609508 535 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 MIR548AZ-201ENST00000616567 95 ntBASIC-0.71□□□□□ -2.52
CCDC58Q4VC31 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 RNU6-923P-201ENST00000364753 107 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 RNU6-769P-201ENST00000384407 104 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 SNORA32.3-201ENST00000384772 121 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 MIR586-201ENST00000385035 97 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 MIR196A2-201ENST00000385189 110 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 USP9YP29-201ENST00000445112 563 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 AC026470.2-201ENST00000561492 181 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 MIR5006-201ENST00000583027 110 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 AL596327.1-201ENST00000603629 213 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 AC008250.2-201ENST00000615261 205 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 FTX_2.1-201ENST00000618816 94 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 uc_338.36-201ENST00000622331 158 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 snoZ196.1-201ENST00000625269 89 ntBASIC-0.72□□□□□ -2.52
CCDC58Q4VC31 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 RNA5SP48-201ENST00000363969 126 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 RNU6-654P-201ENST00000364373 107 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 MIR613-201ENST00000385248 95 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 RNU2-46P-201ENST00000517038 113 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 MTATP6P2-201ENST00000603319 678 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 AL670379.3-201ENST00000605040 251 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 U6.73-201ENST00000619194 103 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 MTND4P4-201ENST00000439033 1366 ntBASIC-0.73□□□□□ -2.53
CCDC58Q4VC31 AC121333.1-201ENST00000567488 2709 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 RNU6-428P-201ENST00000362942 107 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 AL353997.1-201ENST00000432936 108 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 AC004386.2-201ENST00000441858 148 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 AC117522.1-201ENST00000509821 380 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 RNU7-41P-201ENST00000515917 61 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 RNU7-51P-201ENST00000516560 62 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 RNU7-28P-201ENST00000516759 62 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 AC073539.2-201ENST00000597113 165 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 AL592221.1-201ENST00000605266 382 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 MIR6755-201ENST00000619993 66 ntBASIC-0.74□□□□□ -2.53
CCDC58Q4VC31 AC073343.1-201ENST00000328239 651 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 SNORA2A-201ENST00000383885 135 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms