Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX4Q33E94 ACA59.1-201ENST00000515966 143 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 RNU4-49P-201ENST00000516080 140 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 RNU2-34P-201ENST00000516534 121 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 RNU6-58P-201ENST00000517143 103 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 RNA5SP454-201ENST00000517231 127 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX4Q33E94 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX4Q33E94 AK6P2-201ENST00000549020 471 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX4Q33E94 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX4Q33E94 SUB1P3-201ENST00000564581 315 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 MIR4524B-201ENST00000581569 115 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 AC069114.2-201ENST00000604699 304 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 MIR8074-201ENST00000615081 81 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 AL353997.5-201ENST00000618886 171 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 AL359697.1-201ENST00000624879 587 ntBASIC1.24□□□□□ -2.21
RFX4Q33E94 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX4Q33E94 SNORA63D-201ENST00000364359 132 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU6-842P-201ENST00000384269 107 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 Y_RNA.573-201ENST00000384763 105 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU6-174P-201ENST00000410406 106 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 USP9YP30-201ENST00000430729 455 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 HMGN2P34-201ENST00000437647 269 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 HSPE1P9-201ENST00000440046 311 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.23□□□□□ -2.21
RFX4Q33E94 AC069439.1-201ENST00000494739 167 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU6-948P-201ENST00000516374 107 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU6-344P-201ENST00000516635 111 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU6-566P-201ENST00000516790 107 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU1-117P-201ENST00000517041 158 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.23□□□□□ -2.21
RFX4Q33E94 UBL5P4-201ENST00000562584 236 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.23□□□□□ -2.21
RFX4Q33E94 SNORA77B-201ENST00000578179 125 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 AC006001.4-201ENST00000622243 395 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 AL133216.2-202ENST00000634512 349 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 AC073869.6-201ENST00000640656 341 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 AC010615.1-201ENST00000594254 1764 ntBASIC1.23□□□□□ -2.21
RFX4Q33E94 MTND4P12-201ENST00000498999 1377 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RFX4Q33E94 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RFX4Q33E94 Y_RNA.6-201ENST00000362350 114 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 RNU1-17P-201ENST00000363022 152 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 RNU6-873P-201ENST00000363833 107 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 RNU6-1019P-201ENST00000364424 107 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 Y_RNA.287-201ENST00000364853 94 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 Y_RNA.319-201ENST00000365138 92 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 RNU6-17P-201ENST00000384245 107 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 RNU6-18P-201ENST00000384527 107 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 RNU6-57P-201ENST00000411348 103 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 AC009161.1-201ENST00000417306 376 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.22□□□□□ -2.21
RFX4Q33E94 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 RNU7-57P-201ENST00000459540 60 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 AC099513.1-201ENST00000490423 301 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 AC007014.2-201ENST00000615581 479 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 AC009248.2-201ENST00000619826 254 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 AC095038.3-201ENST00000634439 195 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 ZNF72P-201ENST00000425869 1908 ntBASIC1.22□□□□□ -2.21
RFX4Q33E94 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
RFX4Q33E94 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.22□□□□□ -2.21
RFX4Q33E94 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.22□□□□□ -2.21
RFX4Q33E94 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 snoU2-30.2-201ENST00000362805 70 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 SNORD87-201ENST00000364849 89 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 RNU6-596P-201ENST00000365395 98 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 MIR520A-201ENST00000384862 85 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RFX4Q33E94 MIR1277-201ENST00000408536 78 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 RPL30P16-201ENST00000419341 429 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.21□□□□□ -2.22
RFX4Q33E94 CST2P1-201ENST00000425770 87 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 MTCO3P29-201ENST00000432119 779 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 MTND1P4-201ENST00000435196 415 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 RPL26P26-201ENST00000480251 434 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.21□□□□□ -2.22
RFX4Q33E94 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 AC025465.3-201ENST00000510570 311 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 RNA5SP54-201ENST00000516951 92 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.21□□□□□ -2.22
RFX4Q33E94 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.21□□□□□ -2.22
RFX4Q33E94 AL078596.1-201ENST00000624856 447 ntBASIC1.21□□□□□ -2.22
RFX4Q33E94 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.21□□□□□ -2.22
RFX4Q33E94 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
RFX4Q33E94 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFX4Q33E94 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFX4Q33E94 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFX4Q33E94 Y_RNA.48-201ENST00000362710 103 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 Y_RNA.86-201ENST00000363020 111 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 SNORA4.2-201ENST00000365313 147 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 RNU6-245P-201ENST00000384020 107 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 Y_RNA.473-201ENST00000384333 102 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 MIR153-2-201ENST00000385225 87 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 MIR764-201ENST00000390811 85 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 RNU6-482P-201ENST00000391068 107 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms