Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SNORD115.1-201ENST00000391109 76 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.1□□□□□ -2.39
RFX7Q2KHR2 AC106883.1-201ENST00000418805 562 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 AL606489.2-201ENST00000433886 234 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 AC005002.2-201ENST00000438228 269 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.1□□□□□ -2.39
RFX7Q2KHR2 RNU7-94P-201ENST00000459576 63 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 OR9P1P-201ENST00000496431 281 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.1□□□□□ -2.39
RFX7Q2KHR2 RNU6-917P-201ENST00000516294 104 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 AC106038.2-201ENST00000520706 568 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 DEFB131C-201ENST00000528817 165 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.1□□□□□ -2.39
RFX7Q2KHR2 MIRLET7D-201ENST00000362263 87 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 Y_RNA.18-201ENST00000362461 102 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 RNU6-715P-201ENST00000365204 103 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 RPS3AP3-201ENST00000411933 242 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 MTND1P20-201ENST00000430341 950 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 STAG3L5P-204ENST00000443759 179 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.09□□□□□ -2.39
RFX7Q2KHR2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.09□□□□□ -2.39
RFX7Q2KHR2 AC079140.5-201ENST00000507882 310 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 AC105185.1-201ENST00000518705 535 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.09□□□□□ -2.39
RFX7Q2KHR2 AC023827.1-201ENST00000569247 97 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 AP000907.4-201ENST00000604143 237 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 AL049777.1-201ENST00000622740 518 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 U6.108-201ENST00000637764 58 ntBASIC0.09□□□□□ -2.39
RFX7Q2KHR2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.170-201ENST00000363746 110 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 RNU4-1-201ENST00000363925 141 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 RNU6-1303P-201ENST00000364841 107 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 SNORD115-7-201ENST00000365306 82 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AL117339.3-201ENST00000418733 162 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AL354692.1-201ENST00000423044 315 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 MTCO2P23-201ENST00000425216 680 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AL162725.1-201ENST00000435405 301 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 DAP3P1-201ENST00000441522 278 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 MTCO2P7-201ENST00000446518 666 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.08□□□□□ -2.4
RFX7Q2KHR2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AP003181.2-201ENST00000528941 181 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AC109810.1-201ENST00000534066 224 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 MIR4667-201ENST00000578933 66 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AC131055.1-201ENST00000584626 316 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 snoZ196.1-201ENST00000625269 89 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 SNORA43.4-201ENST00000629559 138 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 AC100810.6-201ENST00000638068 285 ntBASIC0.08□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.22-201ENST00000362492 102 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 RNU6-931P-201ENST00000363850 107 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.480-201ENST00000384364 102 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 MIR586-201ENST00000385035 97 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 MTND3P17-201ENST00000416968 344 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AC244098.3-201ENST00000424803 96 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 MTATP6P16-201ENST00000434543 526 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AC009237.7-201ENST00000447357 229 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 snoU13.6-201ENST00000458785 104 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AC108740.1-201ENST00000498629 225 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AC025647.1-201ENST00000517879 253 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AL391903.3-201ENST00000612158 163 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 AL078596.1-201ENST00000624856 447 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 MTND5P16-201ENST00000460269 1703 ntBASIC0.07□□□□□ -2.4
RFX7Q2KHR2 RNU4-92P-201ENST00000363783 136 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.265-201ENST00000364677 108 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RNU6-700P-201ENST00000391043 107 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RNU6-550P-201ENST00000391057 101 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RNU6-1000P-201ENST00000391066 106 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 MTCO2P21-201ENST00000419780 677 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AC104332.1-201ENST00000440471 797 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AL121992.2-201ENST00000606262 256 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AC004832.4-201ENST00000608952 331 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AL607023.1-201ENST00000620045 248 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AC138649.3-201ENST00000622154 254 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 MIR140-201ENST00000385282 100 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RNU6-1106P-201ENST00000390845 107 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 SNORA12.1-201ENST00000390873 148 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RNU6-994P-201ENST00000410507 111 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 MTCO2P34-201ENST00000421994 607 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AC093019.1-201ENST00000443135 252 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 MTCO1P19-201ENST00000443487 500 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.06□□□□□ -2.4
RFX7Q2KHR2 RNU7-12P-201ENST00000516030 62 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 SNORD111.1-201ENST00000516421 86 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms