Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 Y_RNA.654-201ENST00000497848 106 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 HMGB1P29-201ENST00000505659 499 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.98□□□□□ -2.25
SSX2Q16385 RNU6-922P-201ENST00000516753 99 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 SNORA70.22-201ENST00000517160 124 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 RNA5SP454-201ENST00000517231 127 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 CPDP1-201ENST00000579660 283 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 MIR5695-201ENST00000579717 85 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 AL390123.1-201ENST00000603216 237 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 AC092807.2-201ENST00000609367 243 ntBASIC0.98□□□□□ -2.25
SSX2Q16385 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.97□□□□□ -2.25
SSX2Q16385 RNU6-440P-201ENST00000390882 105 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SSX2Q16385 AL591704.2-201ENST00000421658 181 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 MTCO1P29-201ENST00000496868 288 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 RN7SKP298-201ENST00000515950 94 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.97□□□□□ -2.25
SSX2Q16385 AL021879.1-201ENST00000611756 288 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 AC018630.2-201ENST00000534866 2403 ntBASIC0.97□□□□□ -2.25
SSX2Q16385 MIR337-201ENST00000362281 93 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SSX2Q16385 RNU4-55P-201ENST00000410731 137 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.96□□□□□ -2.26
SSX2Q16385 SNORA31.2-201ENST00000516019 134 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 MTND1P5-201ENST00000517906 940 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
SSX2Q16385 AC008088.1-201ENST00000580993 280 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 SNORD11B-201ENST00000607707 90 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 SNORD3E-202ENST00000627253 216 ntBASIC0.96□□□□□ -2.26
SSX2Q16385 SNORD87-201ENST00000364849 89 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 RNU6-505P-201ENST00000384427 107 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 RNU6-910P-201ENST00000390844 107 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.95□□□□□ -2.26
SSX2Q16385 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.95□□□□□ -2.26
SSX2Q16385 CDK8P2-201ENST00000415020 547 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.95□□□□□ -2.26
SSX2Q16385 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.95□□□□□ -2.26
SSX2Q16385 RAB28P5-201ENST00000427490 651 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 RNU6-1208P-201ENST00000459588 107 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 BET1P1-201ENST00000482276 359 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.95□□□□□ -2.26
SSX2Q16385 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.95□□□□□ -2.26
SSX2Q16385 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.95□□□□□ -2.26
SSX2Q16385 RNY1P10-201ENST00000363268 113 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 Y_RNA.164-201ENST00000363709 102 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 Y_RNA.409-201ENST00000383990 98 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 SNORA12.1-201ENST00000390873 148 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 MRPL42P3-201ENST00000401492 326 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 SNRPEP10-201ENST00000420249 274 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 AL445305.1-201ENST00000432577 575 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.94□□□□□ -2.26
SSX2Q16385 AC048334.1-201ENST00000477975 159 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 RNU7-128P-201ENST00000517247 62 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.94□□□□□ -2.26
SSX2Q16385 AC016957.1-201ENST00000534895 309 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.94□□□□□ -2.26
SSX2Q16385 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.94□□□□□ -2.26
SSX2Q16385 AC121247.2-201ENST00000604776 136 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 FAM157A-202ENST00000615155 405 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 Z69908.1-201ENST00000622603 247 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 AL133216.2-202ENST00000634512 349 ntBASIC0.94□□□□□ -2.26
SSX2Q16385 OR4G1P-203ENST00000641984 1631 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 RNU6-392P-201ENST00000364926 101 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.93□□□□□ -2.26
SSX2Q16385 SNORA69-201ENST00000383895 132 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 MIR32-201ENST00000384965 70 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 EIF4E2P1-201ENST00000393781 255 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AL590002.1-201ENST00000406554 418 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AL034345.1-201ENST00000407768 123 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.93□□□□□ -2.26
SSX2Q16385 MTND3P16-201ENST00000452205 344 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 HMGN1P7-201ENST00000491722 313 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 RNA5SP54-201ENST00000516951 92 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AC136932.1-201ENST00000574771 208 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 MIR4778-201ENST00000577635 80 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 MIR4781-201ENST00000585250 76 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AC119751.7-201ENST00000600494 245 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 AC073534.2-201ENST00000620377 381 ntBASIC0.93□□□□□ -2.26
SSX2Q16385 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
SSX2Q16385 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SSX2Q16385 RNU6-727P-201ENST00000363592 107 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 Y_RNA.167-201ENST00000363735 109 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 RNU6-53P-201ENST00000365367 106 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 AC083798.1-201ENST00000472671 131 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 SNORA31.4-201ENST00000516049 129 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 SNORA25.14-201ENST00000516481 132 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 AC104383.1-201ENST00000530297 370 ntBASIC0.92□□□□□ -2.26
SSX2Q16385 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.92□□□□□ -2.26
SSX2Q16385 AC026371.1-201ENST00000551867 419 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms