Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.48□□□□□ -2.49
HMGXB3Q12766 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.48□□□□□ -2.49
HMGXB3Q12766 RNU7-56P-201ENST00000458744 62 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.48□□□□□ -2.49
HMGXB3Q12766 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.48□□□□□ -2.49
HMGXB3Q12766 RNU6-848P-201ENST00000515948 107 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 RNU6-617P-201ENST00000516147 107 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 RNU6-473P-201ENST00000516164 107 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 OR8K2P-201ENST00000524645 927 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.48□□□□□ -2.49
HMGXB3Q12766 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.48□□□□□ -2.49
HMGXB3Q12766 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 RNU1-76P-201ENST00000362903 159 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 RNU5B-1-201ENST00000363286 116 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 RNU6-853P-201ENST00000364306 107 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 RNU6-10P-201ENST00000384036 107 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 RNU6-15P-201ENST00000384534 107 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 MRPL42P3-201ENST00000401492 326 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 SNORD83.1-201ENST00000411362 77 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 AL354692.1-201ENST00000423044 315 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 AC245047.3-201ENST00000429428 127 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.49□□□□□ -2.49
HMGXB3Q12766 AK6P2-201ENST00000549020 471 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.49□□□□□ -2.49
HMGXB3Q12766 RBM11P1-201ENST00000604951 799 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 SNORA25.18-201ENST00000607153 114 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 RMST_7.1-201ENST00000621935 268 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 AL450472.1-202ENST00000637286 180 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 AC099654.8-201ENST00000637757 681 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 U6.108-201ENST00000637764 58 ntBASIC-0.49□□□□□ -2.49
HMGXB3Q12766 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.49□□□□□ -2.49
HMGXB3Q12766 MTND5P33-201ENST00000571250 1450 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 SMIM11P1-201ENST00000369586 178 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 RNU6-269P-201ENST00000391077 97 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.5□□□□□ -2.49
HMGXB3Q12766 RNU7-165P-201ENST00000458864 60 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 AC026616.1-201ENST00000523157 525 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 BCRP9-201ENST00000605312 388 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 AC026585.1-201ENST00000619582 524 ntBASIC-0.5□□□□□ -2.49
HMGXB3Q12766 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
HMGXB3Q12766 RNU6-78P-201ENST00000362897 107 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 SNORA8.2-201ENST00000384372 139 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AL590135.1-201ENST00000422215 156 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC019205.3-201ENST00000424573 156 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC016700.2-201ENST00000446011 156 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC015911.1-201ENST00000495111 156 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC112206.4-201ENST00000515142 405 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 SNORD111.1-201ENST00000516421 86 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 RNA5SP94-201ENST00000516917 108 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC021451.1-201ENST00000523498 1129 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 MIR4753-201ENST00000585119 83 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC092447.9-201ENST00000603395 144 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC006157.1-201ENST00000611750 366 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AC122133.1-201ENST00000613964 233 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 FRG1KP-201ENST00000623592 341 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 AL356596.1-201ENST00000624230 379 ntBASIC-0.51□□□□□ -2.49
HMGXB3Q12766 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
HMGXB3Q12766 RNU6-369P-201ENST00000362515 102 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 SNORD115-24-201ENST00000363528 82 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 AC083799.1-201ENST00000366451 910 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 USP9YP28-201ENST00000435142 589 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 AC119751.4-201ENST00000507498 357 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 RNU4-49P-201ENST00000516080 140 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.52□□□□□ -2.49
HMGXB3Q12766 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.52□□□□□ -2.49
HMGXB3Q12766 AC090517.1-201ENST00000569307 266 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 AL391840.1-201ENST00000571144 367 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 SNORA28-201ENST00000606769 126 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 MIR6755-201ENST00000619993 66 ntBASIC-0.52□□□□□ -2.49
HMGXB3Q12766 RNU6-289P-201ENST00000364093 107 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 snoZ40.1-201ENST00000364540 72 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AL663109.1-201ENST00000411498 844 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 CDK8P2-201ENST00000415020 547 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 MRPS10P2-201ENST00000431226 381 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AC244670.1-201ENST00000436879 112 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 RNU7-159P-201ENST00000459284 62 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AC108729.2-201ENST00000476543 840 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 RNU6-150P-201ENST00000516237 95 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 MTCO3P15-201ENST00000526563 574 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 MIR5697-201ENST00000578045 78 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AC008752.3-201ENST00000588113 712 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AC090186.1-201ENST00000605991 572 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AL359075.3-201ENST00000613288 217 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AC131159.1-201ENST00000621854 213 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AC103706.2-201ENST00000638080 240 ntBASIC-0.53□□□□□ -2.49
HMGXB3Q12766 AP000568.1-201ENST00000282964 442 ntBASIC-0.54□□□□□ -2.5
HMGXB3Q12766 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.54□□□□□ -2.5
HMGXB3Q12766 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.54□□□□□ -2.5
HMGXB3Q12766 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.54□□□□□ -2.5
HMGXB3Q12766 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms