Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-965P-201ENST00000516721 96 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 AC090616.3-201ENST00000582184 217 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 AL355297.2-201ENST00000604792 129 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 AL590240.4-201ENST00000616908 390 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 AC006001.4-201ENST00000622243 395 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 AL137790.1-201ENST00000634283 177 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSRP1Q08945 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SSRP1Q08945 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.21□□□□□ -1.9
SSRP1Q08945 AL365361.1-201ENST00000566942 3481 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.2□□□□□ -1.9
SSRP1Q08945 RNU6-545P-201ENST00000362681 104 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSRP1Q08945 MIR548H3-201ENST00000408771 118 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 HMGN2P9-201ENST00000476875 229 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 ATP5EP1-201ENST00000510257 156 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 EIF4BP1-201ENST00000554881 351 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 IGHVIII-44-202ENST00000636235 289 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.2□□□□□ -1.9
SSRP1Q08945 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.19□□□□□ -1.9
SSRP1Q08945 SNORD31B-201ENST00000364977 69 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSRP1Q08945 Y_RNA.446-201ENST00000384178 104 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AL590004.2-201ENST00000404787 371 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 SNORD88.1-201ENST00000408684 91 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 RNU2-54P-201ENST00000410299 190 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AC087499.2-201ENST00000432861 149 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AC114982.1-201ENST00000469402 321 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.19□□□□□ -1.9
SSRP1Q08945 LARP7P3-201ENST00000579888 337 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 MIR3128-201ENST00000581957 66 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 MIR4753-201ENST00000585119 83 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.19□□□□□ -1.9
SSRP1Q08945 AC008749.1-201ENST00000597650 306 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AC037487.3-201ENST00000606668 112 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AL449363.1-201ENST00000617815 186 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AC006386.2-201ENST00000624491 75 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AC012005.1-201ENST00000624575 75 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 MIR1248-201ENST00000629190 106 ntBASIC3.19□□□□□ -1.9
SSRP1Q08945 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SSRP1Q08945 RNU6-379P-201ENST00000363813 104 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 RNU6-326P-201ENST00000365480 107 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 Y_RNA.478-201ENST00000384358 107 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 Y_RNA.500-201ENST00000384466 111 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 Y_RNA.569-201ENST00000384749 103 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 MIR548B-201ENST00000385247 97 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 AL138827.1-201ENST00000402666 306 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
SSRP1Q08945 AC092427.1-202ENST00000430569 476 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 POLR2KP2-201ENST00000438155 177 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 AC074290.1-201ENST00000448883 135 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 RPL23AP3-201ENST00000453844 468 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 SRIP1-201ENST00000489235 288 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 SERF1AP1-201ENST00000514575 187 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 RNU6-1023P-201ENST00000516137 106 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 Y_RNA.680-201ENST00000516441 93 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 RNA5SP367-201ENST00000516557 118 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 RNU2-31P-201ENST00000516954 155 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 SCARNA24.2-201ENST00000516968 130 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.18□□□□□ -1.9
SSRP1Q08945 AC006380.1-201ENST00000603598 186 ntBASIC3.18□□□□□ -1.9
SSRP1Q08945 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SSRP1Q08945 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSRP1Q08945 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.17□□□□□ -1.9
SSRP1Q08945 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.17□□□□□ -1.9
SSRP1Q08945 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
SSRP1Q08945 RNU1-112P-201ENST00000364401 164 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 RNA5SP125-201ENST00000364843 120 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 Y_RNA.352-201ENST00000365439 102 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 MIR561-201ENST00000385216 97 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 AL357139.1-201ENST00000407792 426 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 AC009963.1-201ENST00000417265 157 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.17□□□□□ -1.9
SSRP1Q08945 MTND4LP30-201ENST00000454092 297 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 MTND1P19-201ENST00000511780 315 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 RPL23AP94-201ENST00000512518 302 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 RNU6-155P-201ENST00000516347 100 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 RNU2-12P-201ENST00000517216 168 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.17□□□□□ -1.9
SSRP1Q08945 MIR4513-201ENST00000581077 86 ntBASIC3.17□□□□□ -1.9
SSRP1Q08945 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.17□□□□□ -1.9
SSRP1Q08945 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
SSRP1Q08945 MAPK10-266ENST00000641066 6555 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 Y_RNA.60-201ENST00000362831 98 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 RNU6-454P-201ENST00000364292 107 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 Y_RNA.383-201ENST00000383855 97 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 Y_RNA.416-201ENST00000384014 113 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 Y_RNA.477-201ENST00000384352 108 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 RNU6-847P-201ENST00000411115 108 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 RNU6-1199P-201ENST00000411249 104 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 AC016925.1-201ENST00000458303 298 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 UBE2DNL-203ENST00000474922 222 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 RNU6-966P-201ENST00000516479 104 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 AC079600.2-201ENST00000550076 130 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms