Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC130509.1-201ENST00000464158 433 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 RPS29P25-201ENST00000481709 171 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 RPL23AP75-201ENST00000491601 451 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 RNU6-718P-201ENST00000516166 105 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 RNU7-40P-201ENST00000516397 64 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 SNORA59B-202ENST00000578183 701 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AC080078.3-201ENST00000605407 463 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.96□□□□□ -2.26
TNFRSF9Q07011 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 MIR3688-2-201ENST00000636963 87 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 AC100810.6-201ENST00000638068 285 ntBASIC0.96□□□□□ -2.26
TNFRSF9Q07011 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-562P-201ENST00000362731 107 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.100-201ENST00000363141 102 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.135-201ENST00000363439 95 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-877P-201ENST00000383868 107 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-418P-201ENST00000384035 107 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-831P-201ENST00000384548 107 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 MIR1276-201ENST00000408707 83 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-373P-201ENST00000411247 98 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC004866.1-201ENST00000411748 78 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 Z82188.1-201ENST00000436709 154 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC004386.2-201ENST00000441858 148 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AL353572.1-201ENST00000442490 417 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 OR2AQ1P-201ENST00000451972 200 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC079354.2-201ENST00000453523 154 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 MTCO3P8-201ENST00000453691 755 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC016925.1-201ENST00000458303 298 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU1-131P-201ENST00000458943 161 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC010531.2-201ENST00000465012 153 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC087477.1-201ENST00000465747 340 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 MTCO2P30-201ENST00000503662 364 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-1088P-201ENST00000516850 104 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-273P-201ENST00000516937 96 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 RNU6-1314P-201ENST00000517139 104 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC084364.2-201ENST00000546924 395 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AP000907.4-201ENST00000604143 237 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 MIR6504-201ENST00000613520 61 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC090517.2-201ENST00000614966 680 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 U4.5-201ENST00000617137 123 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.95□□□□□ -2.26
TNFRSF9Q07011 MIR3662-201ENST00000637030 95 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 AC073869.6-201ENST00000640656 341 ntBASIC0.95□□□□□ -2.26
TNFRSF9Q07011 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TNFRSF9Q07011 RNU6-414P-201ENST00000363705 104 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 RNU6-1026P-201ENST00000384465 108 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 MIR517A-201ENST00000385001 87 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 MIR1267-201ENST00000408723 78 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.94□□□□□ -2.26
TNFRSF9Q07011 DYNLT3P2-201ENST00000442517 295 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFRSF9Q07011 RPL36AP21-201ENST00000490372 323 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 TRBVA-201ENST00000498804 316 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC093852.1-201ENST00000503587 266 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC097473.1-201ENST00000508142 408 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC011352.1-201ENST00000512300 793 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 MTND1P5-201ENST00000517906 940 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 MIR5006-201ENST00000583027 110 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 POLR3GP2-201ENST00000588366 668 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 RPL17P51-201ENST00000605218 238 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC019193.3-201ENST00000609144 554 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC005562.2-201ENST00000618264 111 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 AC009033.1-201ENST00000624279 431 ntBASIC0.94□□□□□ -2.26
TNFRSF9Q07011 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.94□□□□□ -2.26
TNFRSF9Q07011 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
TNFRSF9Q07011 SNORD33-201ENST00000362761 85 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.132-201ENST00000363421 102 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.224-201ENST00000364308 111 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 RNU6-306P-201ENST00000384617 107 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.573-201ENST00000384763 105 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TNFRSF9Q07011 RPS26P42-201ENST00000413485 326 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 UBE2V1P8-201ENST00000437166 265 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 RPS29P28-201ENST00000446439 141 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.93□□□□□ -2.26
TNFRSF9Q07011 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC007395.1-201ENST00000451333 677 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC007215.1-201ENST00000464893 276 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC010409.1-201ENST00000487382 476 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 RNU6-864P-201ENST00000516256 108 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 SNORA31.17-201ENST00000516953 127 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 SUB1P4-201ENST00000566062 339 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms