Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MRPS36P4-201ENST00000534436 298 ntBASIC0.22□□□□□ -2.37
CCL20P78556 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.22□□□□□ -2.37
CCL20P78556 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.22□□□□□ -2.37
CCL20P78556 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.22□□□□□ -2.37
CCL20P78556 AC011195.1-201ENST00000578177 177 ntBASIC0.22□□□□□ -2.37
CCL20P78556 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.22□□□□□ -2.37
CCL20P78556 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.22□□□□□ -2.37
CCL20P78556 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.22□□□□□ -2.37
CCL20P78556 ZNF204P-201ENST00000416749 2397 ntBASIC0.21□□□□□ -2.38
CCL20P78556 MIR96-201ENST00000362288 78 ntBASIC0.21□□□□□ -2.38
CCL20P78556 RNU6-1266P-201ENST00000362794 105 ntBASIC0.21□□□□□ -2.38
CCL20P78556 Y_RNA.123-201ENST00000363338 102 ntBASIC0.21□□□□□ -2.38
CCL20P78556 Y_RNA.140-201ENST00000363474 103 ntBASIC0.21□□□□□ -2.38
CCL20P78556 RNA5SP504-201ENST00000410676 117 ntBASIC0.21□□□□□ -2.38
CCL20P78556 AC244098.3-201ENST00000424803 96 ntBASIC0.21□□□□□ -2.38
CCL20P78556 AL162725.1-201ENST00000435405 301 ntBASIC0.21□□□□□ -2.38
CCL20P78556 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.21□□□□□ -2.38
CCL20P78556 RNU7-138P-201ENST00000459479 64 ntBASIC0.21□□□□□ -2.38
CCL20P78556 OR9P1P-201ENST00000496431 281 ntBASIC0.21□□□□□ -2.38
CCL20P78556 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
CCL20P78556 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.21□□□□□ -2.38
CCL20P78556 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
CCL20P78556 MIR548AB-201ENST00000584917 84 ntBASIC0.21□□□□□ -2.38
CCL20P78556 AL022161.1-201ENST00000604390 213 ntBASIC0.21□□□□□ -2.38
CCL20P78556 SNORD11B-201ENST00000607707 90 ntBASIC0.21□□□□□ -2.38
CCL20P78556 AC010608.3-201ENST00000625048 527 ntBASIC0.21□□□□□ -2.38
CCL20P78556 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CCL20P78556 RNU6-1067P-201ENST00000384752 107 ntBASIC0.2□□□□□ -2.38
CCL20P78556 MIR620-201ENST00000385232 95 ntBASIC0.2□□□□□ -2.38
CCL20P78556 FGF7P8-201ENST00000402994 292 ntBASIC0.2□□□□□ -2.38
CCL20P78556 AL663109.1-201ENST00000411498 844 ntBASIC0.2□□□□□ -2.38
CCL20P78556 MTCO2P34-201ENST00000421994 607 ntBASIC0.2□□□□□ -2.38
CCL20P78556 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.2□□□□□ -2.38
CCL20P78556 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.2□□□□□ -2.38
CCL20P78556 AC004854.1-201ENST00000440356 349 ntBASIC0.2□□□□□ -2.38
CCL20P78556 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.2□□□□□ -2.38
CCL20P78556 AF186996.7-201ENST00000492781 209 ntBASIC0.2□□□□□ -2.38
CCL20P78556 RNU6-1110P-201ENST00000516462 101 ntBASIC0.2□□□□□ -2.38
CCL20P78556 AP003461.1-201ENST00000528866 78 ntBASIC0.2□□□□□ -2.38
CCL20P78556 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CCL20P78556 FRG2DP-202ENST00000566967 323 ntBASIC0.2□□□□□ -2.38
CCL20P78556 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CCL20P78556 MIR3192-201ENST00000584920 77 ntBASIC0.2□□□□□ -2.38
CCL20P78556 AC004223.2-201ENST00000590309 544 ntBASIC0.2□□□□□ -2.38
CCL20P78556 AC093913.1-201ENST00000614178 329 ntBASIC0.2□□□□□ -2.38
CCL20P78556 AC137590.2-201ENST00000619709 240 ntBASIC0.2□□□□□ -2.38
CCL20P78556 MIR103A2-201ENST00000362154 78 ntBASIC0.19□□□□□ -2.38
CCL20P78556 RNA5SP264-201ENST00000363115 107 ntBASIC0.19□□□□□ -2.38
CCL20P78556 RNY1P8-201ENST00000383970 114 ntBASIC0.19□□□□□ -2.38
CCL20P78556 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
CCL20P78556 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
CCL20P78556 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.19□□□□□ -2.38
CCL20P78556 AC009961.2-201ENST00000435771 251 ntBASIC0.19□□□□□ -2.38
CCL20P78556 USP9YP29-201ENST00000445112 563 ntBASIC0.19□□□□□ -2.38
CCL20P78556 SNRPFP3-201ENST00000457792 225 ntBASIC0.19□□□□□ -2.38
CCL20P78556 U8.21-201ENST00000459536 136 ntBASIC0.19□□□□□ -2.38
CCL20P78556 MTND4LP26-201ENST00000518144 282 ntBASIC0.19□□□□□ -2.38
CCL20P78556 AL137161.1-201ENST00000532231 390 ntBASIC0.19□□□□□ -2.38
CCL20P78556 AC008015.1-201ENST00000555505 465 ntBASIC0.19□□□□□ -2.38
CCL20P78556 MIR4714-201ENST00000580728 77 ntBASIC0.19□□□□□ -2.38
CCL20P78556 MIR5583-1-201ENST00000580941 59 ntBASIC0.19□□□□□ -2.38
CCL20P78556 FGF7P1-201ENST00000582820 288 ntBASIC0.19□□□□□ -2.38
CCL20P78556 MIR4438-201ENST00000585271 93 ntBASIC0.19□□□□□ -2.38
CCL20P78556 AL117336.2-201ENST00000602435 335 ntBASIC0.19□□□□□ -2.38
CCL20P78556 snoU13.31-201ENST00000607291 104 ntBASIC0.19□□□□□ -2.38
CCL20P78556 AC007014.2-201ENST00000615581 479 ntBASIC0.19□□□□□ -2.38
CCL20P78556 AC100810.6-201ENST00000638068 285 ntBASIC0.19□□□□□ -2.38
CCL20P78556 MTND5P16-201ENST00000460269 1703 ntBASIC0.18□□□□□ -2.38
CCL20P78556 MIR487A-201ENST00000385009 80 ntBASIC0.18□□□□□ -2.38
CCL20P78556 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CCL20P78556 MIR1185-2-201ENST00000408687 86 ntBASIC0.18□□□□□ -2.38
CCL20P78556 RNU2-29P-201ENST00000410423 189 ntBASIC0.18□□□□□ -2.38
CCL20P78556 AC067940.1-201ENST00000458411 300 ntBASIC0.18□□□□□ -2.38
CCL20P78556 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.18□□□□□ -2.38
CCL20P78556 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.18□□□□□ -2.38
CCL20P78556 RNU2-56P-201ENST00000516826 190 ntBASIC0.18□□□□□ -2.38
CCL20P78556 RNU6-58P-201ENST00000517143 103 ntBASIC0.18□□□□□ -2.38
CCL20P78556 FAM106DP-201ENST00000586416 501 ntBASIC0.18□□□□□ -2.38
CCL20P78556 AL512605.2-201ENST00000592972 256 ntBASIC0.18□□□□□ -2.38
CCL20P78556 AL359821.1-201ENST00000605519 182 ntBASIC0.18□□□□□ -2.38
CCL20P78556 AL136317.1-201ENST00000612653 226 ntBASIC0.18□□□□□ -2.38
CCL20P78556 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CCL20P78556 SEPT14P17-201ENST00000617978 177 ntBASIC0.18□□□□□ -2.38
CCL20P78556 AP002371.2-201ENST00000624450 503 ntBASIC0.18□□□□□ -2.38
CCL20P78556 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.18□□□□□ -2.38
CCL20P78556 MIR6079-201ENST00000635807 62 ntBASIC0.18□□□□□ -2.38
CCL20P78556 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.18□□□□□ -2.38
CCL20P78556 AC005592.1-201ENST00000566527 1640 ntBASIC0.17□□□□□ -2.38
CCL20P78556 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
CCL20P78556 RNA5SP99-201ENST00000364020 114 ntBASIC0.17□□□□□ -2.38
CCL20P78556 RNU6-1317P-201ENST00000364582 104 ntBASIC0.17□□□□□ -2.38
CCL20P78556 SNORD87-201ENST00000364849 89 ntBASIC0.17□□□□□ -2.38
CCL20P78556 RNU6-456P-201ENST00000384493 107 ntBASIC0.17□□□□□ -2.38
CCL20P78556 MTCO2P8-201ENST00000412213 658 ntBASIC0.17□□□□□ -2.38
CCL20P78556 MTCYBP10-201ENST00000424905 650 ntBASIC0.17□□□□□ -2.38
CCL20P78556 AC093019.1-201ENST00000443135 252 ntBASIC0.17□□□□□ -2.38
CCL20P78556 MTCO1P19-201ENST00000443487 500 ntBASIC0.17□□□□□ -2.38
CCL20P78556 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.17□□□□□ -2.38
CCL20P78556 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.17□□□□□ -2.38
CCL20P78556 TRMT112P2-201ENST00000512910 132 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms