Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AC087441.2-201ENST00000529141 262 ntBASIC1.68□□□□□ -2.14
SRPXP78539 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.68□□□□□ -2.14
SRPXP78539 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.68□□□□□ -2.14
SRPXP78539 AC008749.1-201ENST00000597650 306 ntBASIC1.68□□□□□ -2.14
SRPXP78539 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.68□□□□□ -2.14
SRPXP78539 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.68□□□□□ -2.14
SRPXP78539 AL162373.1-201ENST00000620433 407 ntBASIC1.68□□□□□ -2.14
SRPXP78539 AC130454.1-201ENST00000622948 401 ntBASIC1.68□□□□□ -2.14
SRPXP78539 AC090574.1-201ENST00000623186 233 ntBASIC1.68□□□□□ -2.14
SRPXP78539 AL078596.1-201ENST00000624856 447 ntBASIC1.68□□□□□ -2.14
SRPXP78539 AC008873.1-201ENST00000625051 138 ntBASIC1.68□□□□□ -2.14
SRPXP78539 AC068205.3-201ENST00000636385 468 ntBASIC1.68□□□□□ -2.14
SRPXP78539 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.68□□□□□ -2.14
SRPXP78539 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
SRPXP78539 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SRPXP78539 AC009487.4-201ENST00000624969 3585 ntBASIC1.68□□□□□ -2.14
SRPXP78539 AC131280.1-202ENST00000624067 4211 ntBASIC1.67□□□□□ -2.14
SRPXP78539 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SRPXP78539 RNU1-58P-201ENST00000362413 163 ntBASIC1.67□□□□□ -2.14
SRPXP78539 Y_RNA.31-201ENST00000362574 102 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNU6-1301P-201ENST00000362724 104 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNU6-23P-201ENST00000363283 107 ntBASIC1.67□□□□□ -2.14
SRPXP78539 Y_RNA.132-201ENST00000363421 102 ntBASIC1.67□□□□□ -2.14
SRPXP78539 Y_RNA.138-201ENST00000363462 102 ntBASIC1.67□□□□□ -2.14
SRPXP78539 SNORD42.2-201ENST00000365570 69 ntBASIC1.67□□□□□ -2.14
SRPXP78539 Y_RNA.428-201ENST00000384078 102 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNU6-160P-201ENST00000384591 107 ntBASIC1.67□□□□□ -2.14
SRPXP78539 MIR17-201ENST00000385012 84 ntBASIC1.67□□□□□ -2.14
SRPXP78539 MIR586-201ENST00000385035 97 ntBASIC1.67□□□□□ -2.14
SRPXP78539 MIR29C-201ENST00000385231 88 ntBASIC1.67□□□□□ -2.14
SRPXP78539 MIR548B-201ENST00000385247 97 ntBASIC1.67□□□□□ -2.14
SRPXP78539 Y_RNA.605-201ENST00000410577 105 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RN7SKP284-201ENST00000411002 343 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNA5SP450-201ENST00000411206 102 ntBASIC1.67□□□□□ -2.14
SRPXP78539 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.67□□□□□ -2.14
SRPXP78539 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.67□□□□□ -2.14
SRPXP78539 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNA5SP233-201ENST00000459153 113 ntBASIC1.67□□□□□ -2.14
SRPXP78539 HMGN1P13-201ENST00000505795 138 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNU6-1170P-201ENST00000515974 106 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNU7-4P-201ENST00000516961 62 ntBASIC1.67□□□□□ -2.14
SRPXP78539 SNORD116.3-201ENST00000517176 78 ntBASIC1.67□□□□□ -2.14
SRPXP78539 RNU2-19P-201ENST00000517288 84 ntBASIC1.67□□□□□ -2.14
SRPXP78539 MIR3169-201ENST00000578032 83 ntBASIC1.67□□□□□ -2.14
SRPXP78539 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
SRPXP78539 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.67□□□□□ -2.14
SRPXP78539 AC013412.1-201ENST00000610687 192 ntBASIC1.67□□□□□ -2.14
SRPXP78539 uc_338.22-201ENST00000622722 187 ntBASIC1.67□□□□□ -2.14
SRPXP78539 AC091925.1-201ENST00000623204 462 ntBASIC1.67□□□□□ -2.14
SRPXP78539 AC091932.3-201ENST00000624223 323 ntBASIC1.67□□□□□ -2.14
SRPXP78539 AC022513.1-201ENST00000624512 117 ntBASIC1.67□□□□□ -2.14
SRPXP78539 AC245060.5-201ENST00000610778 3293 ntBASIC1.67□□□□□ -2.14
SRPXP78539 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.66□□□□□ -2.14
SRPXP78539 Y_RNA.80-201ENST00000362996 102 ntBASIC1.66□□□□□ -2.14
SRPXP78539 Y_RNA.431-201ENST00000384086 102 ntBASIC1.66□□□□□ -2.14
SRPXP78539 Y_RNA.460-201ENST00000384255 102 ntBASIC1.66□□□□□ -2.14
SRPXP78539 Y_RNA.485-201ENST00000384395 102 ntBASIC1.66□□□□□ -2.14
SRPXP78539 RNU11-3P-201ENST00000391111 133 ntBASIC1.66□□□□□ -2.14
SRPXP78539 MTND4P28-201ENST00000426217 387 ntBASIC1.66□□□□□ -2.14
SRPXP78539 AC099799.1-201ENST00000439809 192 ntBASIC1.66□□□□□ -2.14
SRPXP78539 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.66□□□□□ -2.14
SRPXP78539 AL137792.2-201ENST00000443484 235 ntBASIC1.66□□□□□ -2.14
SRPXP78539 AC007395.1-201ENST00000451333 677 ntBASIC1.66□□□□□ -2.14
SRPXP78539 RNU7-57P-201ENST00000459540 60 ntBASIC1.66□□□□□ -2.14
SRPXP78539 RNU6-976P-201ENST00000516086 111 ntBASIC1.66□□□□□ -2.14
SRPXP78539 Y_RNA.683-201ENST00000516508 93 ntBASIC1.66□□□□□ -2.14
SRPXP78539 AC091144.1-201ENST00000519573 138 ntBASIC1.66□□□□□ -2.14
SRPXP78539 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.66□□□□□ -2.14
SRPXP78539 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.66□□□□□ -2.14
SRPXP78539 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.66□□□□□ -2.14
SRPXP78539 AC092447.9-201ENST00000603395 144 ntBASIC1.66□□□□□ -2.14
SRPXP78539 AC007485.1-201ENST00000616755 206 ntBASIC1.66□□□□□ -2.14
SRPXP78539 U2.1-201ENST00000618978 145 ntBASIC1.66□□□□□ -2.14
SRPXP78539 AC090971.5-201ENST00000621102 293 ntBASIC1.66□□□□□ -2.14
SRPXP78539 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SRPXP78539 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
SRPXP78539 SNORA5B-201ENST00000363786 132 ntBASIC1.65□□□□□ -2.15
SRPXP78539 RNU6-926P-201ENST00000384075 107 ntBASIC1.65□□□□□ -2.15
SRPXP78539 RNU6-474P-201ENST00000384243 107 ntBASIC1.65□□□□□ -2.15
SRPXP78539 RNU6-1145P-201ENST00000384246 107 ntBASIC1.65□□□□□ -2.15
SRPXP78539 RNU6-975P-201ENST00000384296 105 ntBASIC1.65□□□□□ -2.15
SRPXP78539 RNY1P14-201ENST00000384426 108 ntBASIC1.65□□□□□ -2.15
SRPXP78539 RNU6-57P-201ENST00000411348 103 ntBASIC1.65□□□□□ -2.15
SRPXP78539 AC018865.2-201ENST00000423631 129 ntBASIC1.65□□□□□ -2.15
SRPXP78539 AC096920.1-201ENST00000423991 241 ntBASIC1.65□□□□□ -2.15
SRPXP78539 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.65□□□□□ -2.15
SRPXP78539 Y_RNA.639-201ENST00000458981 102 ntBASIC1.65□□□□□ -2.15
SRPXP78539 RNU4-77P-201ENST00000516692 156 ntBASIC1.65□□□□□ -2.15
SRPXP78539 AC144568.1-201ENST00000520139 137 ntBASIC1.65□□□□□ -2.15
SRPXP78539 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.65□□□□□ -2.15
SRPXP78539 AC006600.1-201ENST00000572529 153 ntBASIC1.65□□□□□ -2.15
SRPXP78539 MIR4529-201ENST00000578110 78 ntBASIC1.65□□□□□ -2.15
SRPXP78539 SNORD58B-201ENST00000607313 66 ntBASIC1.65□□□□□ -2.15
SRPXP78539 MIR4272-201ENST00000635924 64 ntBASIC1.65□□□□□ -2.15
SRPXP78539 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
SRPXP78539 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.65□□□□□ -2.15
SRPXP78539 Y_RNA.252-201ENST00000364556 101 ntBASIC1.64□□□□□ -2.15
SRPXP78539 Y_RNA.395-201ENST00000383945 109 ntBASIC1.64□□□□□ -2.15
SRPXP78539 RNA5SP489-201ENST00000410986 109 ntBASIC1.64□□□□□ -2.15
SRPXP78539 AC060773.1-201ENST00000421698 310 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms