Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.56□□□□□ -2.5
UBA52P62987 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 RNU6-925P-201ENST00000384629 104 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 MIR549A-201ENST00000385268 96 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 RPS3AP3-201ENST00000411933 242 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.57□□□□□ -2.5
UBA52P62987 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.57□□□□□ -2.5
UBA52P62987 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.57□□□□□ -2.5
UBA52P62987 DEFB130C-202ENST00000530001 230 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.57□□□□□ -2.5
UBA52P62987 Z99497.2-201ENST00000603634 310 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 PART1_2.1-201ENST00000612397 250 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 AC005520.5-201ENST00000613926 164 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 U6.42-201ENST00000618440 107 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 uc_338.16-201ENST00000621804 95 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 U4.7-201ENST00000638126 106 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 MTND5P32-201ENST00000560711 1802 ntBASIC-0.57□□□□□ -2.5
UBA52P62987 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
UBA52P62987 RNU5B-1-201ENST00000363286 116 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU4-56P-201ENST00000364700 142 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU6-946P-201ENST00000383878 107 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU4-22P-201ENST00000411058 166 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU4-63P-201ENST00000411313 118 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 USP9YP29-201ENST00000445112 563 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 AC114811.1-201ENST00000507207 168 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 AC010468.3-201ENST00000508225 458 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.58□□□□□ -2.5
UBA52P62987 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNA5SP268-201ENST00000516828 124 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU2-12P-201ENST00000517216 168 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.58□□□□□ -2.5
UBA52P62987 AP002453.2-201ENST00000533503 320 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 AC009712.1-201ENST00000564938 316 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 MIR548AC-201ENST00000585049 88 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 MIR4753-201ENST00000585119 83 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 AL158042.1-201ENST00000605338 460 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 Z99289.3-201ENST00000605586 594 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 AC023158.2-201ENST00000614876 543 ntBASIC-0.58□□□□□ -2.5
UBA52P62987 RNU6-562P-201ENST00000362731 107 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 SNORA18.1-201ENST00000363418 128 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 RNU6-527P-201ENST00000363425 104 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 SNORD32A-201ENST00000364805 84 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 MT-TQ-201ENST00000387372 72 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 RNU6-278P-201ENST00000390945 109 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 AL353997.1-201ENST00000432936 108 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 AL392103.1-201ENST00000447000 198 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 AL360271.2-201ENST00000447710 161 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 snoU13.21-201ENST00000459368 105 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.59□□□□□ -2.5
UBA52P62987 AC107401.1-201ENST00000503426 685 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 RNU7-41P-201ENST00000515917 61 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 AC026616.1-201ENST00000523157 525 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 MIR5697-201ENST00000578045 78 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 AC087685.1-201ENST00000587507 141 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 DEFB131E-202ENST00000602581 683 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.59□□□□□ -2.5
UBA52P62987 uc_338.36-201ENST00000622331 158 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 AC093875.1-201ENST00000623688 504 ntBASIC-0.59□□□□□ -2.5
UBA52P62987 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.59□□□□□ -2.5
UBA52P62987 RNU6-792P-201ENST00000363490 107 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 RNU6-692P-201ENST00000384496 107 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 MIR1302-7-201ENST00000408841 72 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 RNA5SP266-201ENST00000410273 108 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 AC106883.1-201ENST00000418805 562 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 AC078809.1-201ENST00000427601 140 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 AC005042.3-201ENST00000453230 174 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.6□□□□□ -2.51
UBA52P62987 RNU7-165P-201ENST00000458864 60 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 AC112206.4-201ENST00000515142 405 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.6□□□□□ -2.51
UBA52P62987 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.6□□□□□ -2.51
UBA52P62987 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.6□□□□□ -2.51
UBA52P62987 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.6□□□□□ -2.51
UBA52P62987 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.6□□□□□ -2.51
UBA52P62987 AC025449.1-201ENST00000603896 529 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 SNORA28-201ENST00000606769 126 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 MTND4P4-201ENST00000439033 1366 ntBASIC-0.6□□□□□ -2.51
UBA52P62987 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
UBA52P62987 RNU6-511P-201ENST00000363496 107 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 MIR635-201ENST00000384830 98 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 MIR1253-201ENST00000408273 105 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 RNU4-46P-201ENST00000410818 138 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.61□□□□□ -2.51
UBA52P62987 AL953862.1-201ENST00000423016 168 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
UBA52P62987 BTF3P11-201ENST00000426582 477 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 AC013470.1-201ENST00000453438 462 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 SNRPGP7-201ENST00000469016 106 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.61□□□□□ -2.51
UBA52P62987 RNU6-138P-201ENST00000515952 107 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 RNU4-49P-201ENST00000516080 140 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 IGKV1-22-201ENST00000524313 326 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.61□□□□□ -2.51
UBA52P62987 AC096720.1-201ENST00000604441 183 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms