Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC074290.1-201ENST00000448883 135 ntBASIC1.57□□□□□ -2.16
RPS4XP62701 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS4XP62701 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
RPS4XP62701 HMGB3P17-201ENST00000504195 649 ntBASIC1.57□□□□□ -2.16
RPS4XP62701 AC046134.1-201ENST00000514454 666 ntBASIC1.57□□□□□ -2.16
RPS4XP62701 RNU7-175P-201ENST00000515915 61 ntBASIC1.57□□□□□ -2.16
RPS4XP62701 AL590705.4-201ENST00000532209 134 ntBASIC1.57□□□□□ -2.16
RPS4XP62701 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS4XP62701 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
RPS4XP62701 AC018462.2-201ENST00000605375 395 ntBASIC1.57□□□□□ -2.16
RPS4XP62701 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RPS4XP62701 RNU6-862P-201ENST00000362804 105 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 Y_RNA.339-201ENST00000365325 102 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 RNU6-541P-201ENST00000384709 110 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 RNU6-159P-201ENST00000391080 106 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 AL627390.1-201ENST00000396055 340 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 AC074085.1-201ENST00000413598 418 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 AC016717.1-201ENST00000448918 286 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 AC011406.1-201ENST00000512440 370 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 RNU6-1053P-201ENST00000515930 101 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 RNA5SP384-201ENST00000516615 116 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.56□□□□□ -2.16
RPS4XP62701 MIR4498-201ENST00000577599 66 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS4XP62701 SNORD11B-201ENST00000607707 90 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.56□□□□□ -2.16
RPS4XP62701 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.56□□□□□ -2.16
RPS4XP62701 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPS4XP62701 AC245060.5-201ENST00000610778 3293 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 RNU6-661P-201ENST00000362409 107 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 RNU5F-3P-201ENST00000363767 117 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 RNU6-873P-201ENST00000363833 107 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 RNU6-280P-201ENST00000364145 104 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 Y_RNA.248-201ENST00000364501 109 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPS4XP62701 RNU6-296P-201ENST00000384608 107 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RPS4XP62701 FGF7P8-201ENST00000402994 292 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.55□□□□□ -2.16
RPS4XP62701 AC112492.4-201ENST00000456549 352 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPS4XP62701 AC026782.1-201ENST00000512952 449 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 RNU6-1041P-201ENST00000516254 102 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 SNORA25.14-201ENST00000516481 132 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 RNU6-1016P-201ENST00000516689 94 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 AC134698.4-201ENST00000523451 826 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 AC069114.2-201ENST00000604699 304 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 AL078596.1-201ENST00000624856 447 ntBASIC1.55□□□□□ -2.16
RPS4XP62701 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.55□□□□□ -2.16
RPS4XP62701 MIR378A-201ENST00000362177 66 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 Y_RNA.4-201ENST00000362333 112 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 Y_RNA.405-201ENST00000383979 100 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 Y_RNA.451-201ENST00000384200 100 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 Y_RNA.524-201ENST00000384564 100 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 Y_RNA.561-201ENST00000384694 100 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPS4XP62701 RNA5SP504-201ENST00000410676 117 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 USMG5P1-201ENST00000425964 177 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 NDUFB4P10-201ENST00000452541 359 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 RNU7-57P-201ENST00000459540 60 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 MIR338-201ENST00000636369 67 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 AC068205.3-201ENST00000636385 468 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RPS4XP62701 MTND4P12-201ENST00000498999 1377 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 CASC19-280ENST00000642102 1351 ntBASIC1.54□□□□□ -2.16
RPS4XP62701 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
RPS4XP62701 Y_RNA.164-201ENST00000363709 102 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 RNU1-96P-201ENST00000364163 162 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 RNU6-1019P-201ENST00000364424 107 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 Y_RNA.238-201ENST00000364441 102 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 Y_RNA.279-201ENST00000364763 95 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.53□□□□□ -2.16
RPS4XP62701 RNU6-767P-201ENST00000384132 107 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RPS4XP62701 MIR548F5-201ENST00000408421 86 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 RPL21P111-201ENST00000418453 477 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 CST2P1-201ENST00000425770 87 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 MTND1P2-201ENST00000430604 821 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 AC245047.4-201ENST00000433189 144 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 RPS3AP52-201ENST00000435639 297 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 AC107399.1-201ENST00000451226 265 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.53□□□□□ -2.16
RPS4XP62701 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.16
RPS4XP62701 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.53□□□□□ -2.16
RPS4XP62701 SNORA44.1-201ENST00000517031 108 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 CBX3P8-201ENST00000532412 525 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS4XP62701 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.53□□□□□ -2.16
RPS4XP62701 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.53□□□□□ -2.16
RPS4XP62701 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 MIR5701-3-201ENST00000578890 82 ntBASIC1.53□□□□□ -2.16
RPS4XP62701 MIR5701-1-201ENST00000585138 82 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms