Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 Y_RNA.101-201ENST00000363154 102 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 RNY1-201ENST00000364228 113 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 RNU6-740P-201ENST00000364734 105 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 Y_RNA.418-201ENST00000384029 102 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 MIR512-1-201ENST00000384913 84 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 SNORA12-201ENST00000391162 147 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 MIR548I3-201ENST00000408378 149 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 MIR548I1-201ENST00000408810 149 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 RNA5SP475-201ENST00000410568 110 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 ELOCP21-201ENST00000412558 336 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.17□□□□□ -1.9
HERVK_113P62684 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.17□□□□□ -1.9
HERVK_113P62684 MRPS36P2-201ENST00000512569 299 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 Y_RNA.679-201ENST00000516416 91 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.17□□□□□ -1.9
HERVK_113P62684 RPL21P9-201ENST00000556149 474 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.17□□□□□ -1.9
HERVK_113P62684 AC022441.3-201ENST00000605737 136 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.17□□□□□ -1.9
HERVK_113P62684 AC098479.1-201ENST00000609225 154 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HERVK_113P62684 AC092593.1-201ENST00000515413 1815 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.16□□□□□ -1.9
HERVK_113P62684 AC026241.1-201ENST00000517873 2142 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 Y_RNA.29-201ENST00000362570 113 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 RNU1-35P-201ENST00000362782 153 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 Y_RNA.76-201ENST00000362931 109 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 Y_RNA.83-201ENST00000363005 113 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 Y_RNA.199-201ENST00000364014 102 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 RNU6-1310P-201ENST00000384153 107 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 AL139156.1-201ENST00000412785 841 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 MTCO1P5-201ENST00000433573 344 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113P62684 NDUFB4P10-201ENST00000452541 359 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 AC091959.1-201ENST00000495857 238 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 RNU6-155P-201ENST00000516347 100 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113P62684 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.16□□□□□ -1.9
HERVK_113P62684 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113P62684 AL512605.2-201ENST00000592972 256 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 AL162424.1-201ENST00000602325 221 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 TCL6_2.1-201ENST00000615162 119 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 AL590240.4-201ENST00000616908 390 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 AC090517.3-201ENST00000625170 141 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.16□□□□□ -1.9
HERVK_113P62684 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.16□□□□□ -1.9
HERVK_113P62684 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
HERVK_113P62684 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.15□□□□□ -1.9
HERVK_113P62684 SNORD87-201ENST00000364849 89 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 Y_RNA.785-201ENST00000384290 109 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 RNU4-70P-201ENST00000384579 139 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 SNORA67.4-201ENST00000384688 142 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 Y_RNA.590-201ENST00000410140 107 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 AC004866.1-201ENST00000411748 78 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.15□□□□□ -1.91
HERVK_113P62684 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.15□□□□□ -1.91
HERVK_113P62684 RNU6-966P-201ENST00000516479 104 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 RNA5SP148-201ENST00000516527 94 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 RNU2-44P-201ENST00000516795 194 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 Y_RNA.700-201ENST00000516806 100 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 DEFB131C-201ENST00000528817 165 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.15□□□□□ -1.91
HERVK_113P62684 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.15□□□□□ -1.91
HERVK_113P62684 AC008739.2-201ENST00000597006 317 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 RPL30P11-203ENST00000598995 310 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 SNORD11B-201ENST00000607707 90 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 AC002064.3-201ENST00000623448 346 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 MIR3674-201ENST00000636576 68 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.15□□□□□ -1.91
HERVK_113P62684 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HERVK_113P62684 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HERVK_113P62684 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
HERVK_113P62684 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HERVK_113P62684 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HERVK_113P62684 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HERVK_113P62684 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HERVK_113P62684 RNU6-651P-201ENST00000411040 105 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 Y_RNA.793-201ENST00000411222 111 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 EIF4EP4-201ENST00000424916 578 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 SUMO1P2-201ENST00000452524 304 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 AL138752.1-201ENST00000452964 351 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 AC091179.1-201ENST00000461606 579 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.14□□□□□ -1.91
HERVK_113P62684 AC096725.1-201ENST00000514266 313 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.14□□□□□ -1.91
HERVK_113P62684 AC103810.1-201ENST00000579873 453 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 MIR3145-201ENST00000580727 82 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 ZNF861P-201ENST00000588126 639 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 AL590808.1-201ENST00000618696 141 ntBASIC3.14□□□□□ -1.91
HERVK_113P62684 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HERVK_113P62684 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
HERVK_113P62684 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.13□□□□□ -1.91
HERVK_113P62684 Y_RNA.275-201ENST00000364726 110 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 RNU2-61P-201ENST00000411069 191 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.13□□□□□ -1.91
HERVK_113P62684 AL121890.1-201ENST00000435457 205 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms