Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.15□□□□□ -2.39
HIST1H2BDP58876 MTND1P5-201ENST00000517906 940 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AP000889.1-201ENST00000530968 660 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H2BDP58876 MIR4438-201ENST00000585271 93 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AC137590.2-201ENST00000619709 240 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AC005592.1-201ENST00000566527 1640 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
HIST1H2BDP58876 MIRLET7C-201ENST00000362160 84 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 RNU6-1266P-201ENST00000362794 105 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 Y_RNA.333-201ENST00000365274 102 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 MIR216A-201ENST00000385063 110 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 MIR450B-201ENST00000401182 78 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 MIR1261-201ENST00000408659 82 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 RNU2-29P-201ENST00000410423 189 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AC092628.1-201ENST00000436250 252 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AC108740.1-201ENST00000498629 225 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AC091133.4-201ENST00000511142 308 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 RNU6-229P-201ENST00000516614 102 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 RNU7-28P-201ENST00000516759 62 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 RNU6-58P-201ENST00000517143 103 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AL137161.1-201ENST00000532231 390 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AK6P2-201ENST00000549020 471 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 RNU6-94P-201ENST00000607728 107 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AC017083.3-201ENST00000609955 700 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AL136317.1-201ENST00000612653 226 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 AC010608.3-201ENST00000625048 527 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 OR5AK4P-201ENST00000635912 903 ntBASIC0.14□□□□□ -2.39
HIST1H2BDP58876 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.13□□□□□ -2.39
HIST1H2BDP58876 SNORD87-201ENST00000364849 89 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 MIR1185-1-201ENST00000408598 86 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H2BDP58876 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.13□□□□□ -2.39
HIST1H2BDP58876 MRPS10P1-201ENST00000448483 130 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H2BDP58876 RNU1-41P-201ENST00000516161 162 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 RNU1-48P-201ENST00000516400 162 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H2BDP58876 AP003461.1-201ENST00000528866 78 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H2BDP58876 HIF1AP1-201ENST00000553642 175 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 MIR5583-1-201ENST00000580941 59 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 7SK.7-201ENST00000603504 247 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 AC064836.2-201ENST00000609491 462 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 SCARNA4.1-201ENST00000628597 123 ntBASIC0.13□□□□□ -2.39
HIST1H2BDP58876 SNORA25.3-201ENST00000363205 127 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 RNU6-1317P-201ENST00000364582 104 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 RNU6-793P-201ENST00000384233 104 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 RNU6-342P-201ENST00000384521 104 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 RNU6-606P-201ENST00000384721 111 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 MIR140-201ENST00000385282 100 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
HIST1H2BDP58876 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.12□□□□□ -2.39
HIST1H2BDP58876 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.12□□□□□ -2.39
HIST1H2BDP58876 SNRPFP3-201ENST00000457792 225 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 AC067940.1-201ENST00000458411 300 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.12□□□□□ -2.39
HIST1H2BDP58876 RNU2-56P-201ENST00000516826 190 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 RNU6-548P-201ENST00000517083 115 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
HIST1H2BDP58876 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
HIST1H2BDP58876 AC023157.2-201ENST00000540596 141 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.12□□□□□ -2.39
HIST1H2BDP58876 AC027288.2-201ENST00000553028 243 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 AL390237.1-201ENST00000404226 1415 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.12□□□□□ -2.39
HIST1H2BDP58876 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 SNORD114-27-201ENST00000363766 70 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 RNU6-1327P-201ENST00000365302 105 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 RNU6-17P-201ENST00000384245 107 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 RNU6-18P-201ENST00000384527 107 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 SNORD105-201ENST00000386910 85 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 RNU6-903P-201ENST00000391270 109 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 MIR1289-2-201ENST00000408360 111 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 RNU6-177P-201ENST00000411257 104 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.11□□□□□ -2.39
HIST1H2BDP58876 SNORD65B-201ENST00000459126 73 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 U8.21-201ENST00000459536 136 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.11□□□□□ -2.39
HIST1H2BDP58876 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AC098799.1-201ENST00000504752 800 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AP001372.4-201ENST00000524889 472 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AC036111.3-201ENST00000526389 112 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 MTND1P35-201ENST00000526739 508 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AL391834.2-201ENST00000609982 546 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.11□□□□□ -2.39
HIST1H2BDP58876 AP002371.2-201ENST00000624450 503 ntBASIC0.11□□□□□ -2.39
HIST1H2BDP58876 Y_RNA.336-201ENST00000365307 109 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 RNU6-282P-201ENST00000365357 103 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 RNU6-245P-201ENST00000384020 107 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 RNU6-456P-201ENST00000384493 107 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.1□□□□□ -2.39
HIST1H2BDP58876 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 MTCO2P8-201ENST00000412213 658 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.1□□□□□ -2.39
HIST1H2BDP58876 MTCO2P18-201ENST00000457151 658 ntBASIC0.1□□□□□ -2.39
HIST1H2BDP58876 HMGN2P26-201ENST00000463169 339 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms