Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC005014.2-201ENST00000607795 599 ntBASIC2.41□□□□□ -2.02
RHBDL3P58872 AC010999.1-201ENST00000611856 324 ntBASIC2.41□□□□□ -2.02
RHBDL3P58872 MIR6845-201ENST00000613182 61 ntBASIC2.41□□□□□ -2.02
RHBDL3P58872 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
RHBDL3P58872 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
RHBDL3P58872 Y_RNA.364-201ENST00000365532 101 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 RNU4-52P-201ENST00000384209 138 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 MIR676-201ENST00000390702 67 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 SNORA26.9-201ENST00000391322 122 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 WARS2P1-201ENST00000429678 537 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 AL603825.1-201ENST00000438481 80 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.4□□□□□ -2.03
RHBDL3P58872 RPL7P42-201ENST00000481005 679 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.4□□□□□ -2.03
RHBDL3P58872 HMGN1P12-201ENST00000499125 195 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 SNORA44.1-201ENST00000517031 108 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 AC105029.1-201ENST00000520250 669 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 MIR5094-201ENST00000578766 85 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 AC010900.2-201ENST00000604508 210 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 AC133104.2-201ENST00000615272 193 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.4□□□□□ -2.03
RHBDL3P58872 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
RHBDL3P58872 Y_RNA.106-201ENST00000363189 100 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 RNA5SP99-201ENST00000364020 114 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 SNORA72.2-201ENST00000365028 127 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 RNU6-1283P-201ENST00000365314 105 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 MIR10B-201ENST00000385011 110 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 MIR1253-201ENST00000408273 105 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 CST2P1-201ENST00000425770 87 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.39□□□□□ -2.03
RHBDL3P58872 UBL5P4-201ENST00000562584 236 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.39□□□□□ -2.03
RHBDL3P58872 MIR5695-201ENST00000579717 85 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 MIR4448-201ENST00000584360 86 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 UBE2V2P2-201ENST00000587677 504 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 SNRPGP19-201ENST00000603826 189 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 AC113139.1-201ENST00000605049 239 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 AL355073.2-201ENST00000612106 557 ntBASIC2.39□□□□□ -2.03
RHBDL3P58872 ZNF72P-201ENST00000425869 1908 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RHBDL3P58872 RNU1-96P-201ENST00000364163 162 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 RNU6-1019P-201ENST00000364424 107 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 Y_RNA.473-201ENST00000384333 102 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 RNA5SP100-201ENST00000410903 110 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 RNA5SP59-201ENST00000410922 110 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 RNU6-57P-201ENST00000411348 103 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AC060773.1-201ENST00000421698 310 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.38□□□□□ -2.03
RHBDL3P58872 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.38□□□□□ -2.03
RHBDL3P58872 MTND4P18-201ENST00000447010 465 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AC016717.1-201ENST00000448918 286 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.38□□□□□ -2.03
RHBDL3P58872 RPL17P19-201ENST00000489069 552 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.38□□□□□ -2.03
RHBDL3P58872 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 Y_RNA.683-201ENST00000516508 93 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 RNU6-264P-201ENST00000517134 104 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AC091144.1-201ENST00000519573 138 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.38□□□□□ -2.03
RHBDL3P58872 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.38□□□□□ -2.03
RHBDL3P58872 AC016727.1-205ENST00000605437 569 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AC092794.2-201ENST00000620933 563 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 AL669831.3-213ENST00000636676 183 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 ZNF720P1-201ENST00000562403 1939 ntBASIC2.38□□□□□ -2.03
RHBDL3P58872 RNU6-1266P-201ENST00000362794 105 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.37□□□□□ -2.03
RHBDL3P58872 RNU6-221P-201ENST00000459541 99 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 AC091179.3-201ENST00000474761 144 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 RNA5SP384-201ENST00000516615 116 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 AC110588.1-201ENST00000559699 137 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 MIR4801-201ENST00000582704 82 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 AC002984.1-201ENST00000591692 448 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 AL353997.5-201ENST00000618886 171 ntBASIC2.37□□□□□ -2.03
RHBDL3P58872 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RHBDL3P58872 RNU6-862P-201ENST00000362804 105 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 snoU2-30.2-201ENST00000362805 70 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.36□□□□□ -2.03
RHBDL3P58872 MIR520A-201ENST00000384862 85 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 RNU6-370P-201ENST00000411008 104 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 AL353997.1-201ENST00000432936 108 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.36□□□□□ -2.03
RHBDL3P58872 SCARNA16.2-201ENST00000516520 172 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 AC004584.2-201ENST00000570407 410 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 AC006001.4-201ENST00000622243 395 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 MTND5P16-201ENST00000460269 1703 ntBASIC2.36□□□□□ -2.03
RHBDL3P58872 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RHBDL3P58872 Y_RNA.142-201ENST00000363491 102 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 Y_RNA.404-201ENST00000383978 102 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 RNU6-281P-201ENST00000384212 103 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 RNA5SP504-201ENST00000410676 117 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 RNA5SP489-201ENST00000410986 109 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms