Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MIR6073-201ENST00000352083 89 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 Y_RNA.99-201ENST00000363138 105 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 SNORA22B-201ENST00000383876 138 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 RNU6-318P-201ENST00000384283 103 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 SNORA67.2-201ENST00000384300 149 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 AL033519.2-201ENST00000403958 392 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 MIR1289-2-201ENST00000408360 111 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 AC123900.1-201ENST00000420390 96 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN2P57739 NDUFB4P10-201ENST00000452541 359 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN2P57739 AC074133.1-201ENST00000515696 183 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 RNU6-991P-201ENST00000516168 107 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 PRELID2P1-201ENST00000552837 301 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 HSBP1P1-201ENST00000555205 166 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
CLDN2P57739 MZT1P2-201ENST00000604387 248 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.21□□□□□ -2.06
CLDN2P57739 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.21□□□□□ -2.06
CLDN2P57739 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN2P57739 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN2P57739 AC009487.4-201ENST00000624969 3585 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 RNU6-545P-201ENST00000362681 104 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 RNA5SP361-201ENST00000362686 118 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 Y_RNA.132-201ENST00000363421 102 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 SNORA63-201ENST00000363450 132 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 AL079342.1-201ENST00000401460 267 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 AL023284.1-201ENST00000403956 276 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN2P57739 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN2P57739 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN2P57739 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN2P57739 RNU2-34P-201ENST00000516534 121 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN2P57739 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN2P57739 AL078596.1-201ENST00000624856 447 ntBASIC2.2□□□□□ -2.06
CLDN2P57739 RNA5SP432-201ENST00000362480 116 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 RNU1-52P-201ENST00000384190 164 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 MIR504-201ENST00000385065 83 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 SNORA40.19-201ENST00000390846 128 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 SNORD78.2-201ENST00000391076 69 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 MRPL42P3-201ENST00000401492 326 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 RNA5SP504-201ENST00000410676 117 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 HMGN2P35-201ENST00000412164 270 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 PCNPP5-201ENST00000452246 481 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN2P57739 UBL5P3-201ENST00000475112 231 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 HMGN2P9-201ENST00000476875 229 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
CLDN2P57739 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN2P57739 RNU1-117P-201ENST00000517041 158 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 Y_RNA.721-201ENST00000517207 102 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 RPS29P30-201ENST00000600975 111 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN2P57739 AC010297.1-201ENST00000623948 149 ntBASIC2.19□□□□□ -2.06
CLDN2P57739 RNU6-727P-201ENST00000363592 107 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 Y_RNA.158-201ENST00000363651 101 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 U3.8-201ENST00000363675 217 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 RNU6-1305P-201ENST00000364353 104 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 SNORD14.1-201ENST00000365609 90 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 Y_RNA.415-201ENST00000384012 112 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 Y_RNA.422-201ENST00000384054 114 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 Y_RNA.424-201ENST00000384063 103 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 SNORD14D-201ENST00000384390 87 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 MIR29C-201ENST00000385231 88 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 SNORD12B-201ENST00000410433 91 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 SDAD1P3-201ENST00000427380 333 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 UQCRBP2-201ENST00000447827 297 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 FCF1P4-201ENST00000448326 183 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 AL139109.1-201ENST00000455491 297 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN2P57739 AC087441.2-201ENST00000529141 262 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN2P57739 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN2P57739 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 AC007336.1-201ENST00000576365 3828 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 AC016925.2-201ENST00000605108 242 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 AC025754.2-201ENST00000606491 432 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CLDN2P57739 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.18□□□□□ -2.06
CLDN2P57739 AP006437.1-201ENST00000641440 3685 ntBASIC2.18□□□□□ -2.06
CLDN2P57739 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
CLDN2P57739 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN2P57739 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CLDN2P57739 ZNF72P-201ENST00000425869 1908 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 Y_RNA.216-201ENST00000364205 93 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 RNU4-50P-201ENST00000364361 141 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 SNORA33.2-201ENST00000365413 134 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 RNU6-975P-201ENST00000384296 105 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 Y_RNA.485-201ENST00000384395 102 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 MIR1262-201ENST00000408276 93 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN2P57739 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN2P57739 RNU6-1012P-201ENST00000516606 109 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 RNU1-104P-201ENST00000517280 175 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 AP003072.1-201ENST00000531740 145 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CLDN2P57739 AL031274.2-201ENST00000599419 203 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms