Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL033519.2-201ENST00000403958 392 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 MIR1283-1-201ENST00000408494 87 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 Y_RNA.595-201ENST00000410403 105 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN20P56880 AC011753.1-201ENST00000451001 220 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 AC112492.4-201ENST00000456549 352 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 MZT1P2-201ENST00000604387 248 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
CLDN20P56880 AC064859.1-201ENST00000624741 174 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN20P56880 ZNF72P-201ENST00000425869 1908 ntBASIC2.08□□□□□ -2.08
CLDN20P56880 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN20P56880 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.08□□□□□ -2.08
CLDN20P56880 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CLDN20P56880 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CLDN20P56880 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN20P56880 RNU6-545P-201ENST00000362681 104 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 Y_RNA.132-201ENST00000363421 102 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 Y_RNA.216-201ENST00000364205 93 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 SNORA3.2-201ENST00000408221 125 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 AC018634.1-201ENST00000437554 401 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN20P56880 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN20P56880 AC114982.1-201ENST00000469402 321 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 RNU1-117P-201ENST00000517041 158 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN20P56880 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 MIR4753-201ENST00000585119 83 ntBASIC2.07□□□□□ -2.08
CLDN20P56880 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN20P56880 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CLDN20P56880 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLDN20P56880 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN20P56880 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN20P56880 Y_RNA.99-201ENST00000363138 105 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 SNORA63-201ENST00000363450 132 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 RNU6-727P-201ENST00000363592 107 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 Y_RNA.485-201ENST00000384395 102 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 Y_RNA.526-201ENST00000384572 110 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 MRPL42P3-201ENST00000401492 326 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 RNA5SP504-201ENST00000410676 117 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 RN7SKP284-201ENST00000411002 343 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN20P56880 AC123900.1-201ENST00000420390 96 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN20P56880 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN20P56880 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN20P56880 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN20P56880 AC074290.1-201ENST00000448883 135 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AC245102.2-201ENST00000448956 180 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN20P56880 HMGN2P9-201ENST00000476875 229 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AC093852.1-201ENST00000503587 266 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
CLDN20P56880 RNA5SP137-201ENST00000516833 135 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AP003072.1-201ENST00000531740 145 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN20P56880 AC016925.2-201ENST00000605108 242 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AC013412.1-201ENST00000610687 192 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN20P56880 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN20P56880 AL078596.1-201ENST00000624856 447 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
CLDN20P56880 AC080100.1-201ENST00000624239 5356 ntBASIC2.06□□□□□ -2.08
CLDN20P56880 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN20P56880 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 AC091812.1-201ENST00000432235 1948 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN20P56880 RNU6-1305P-201ENST00000364353 104 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 SNORA33.2-201ENST00000365413 134 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 Y_RNA.415-201ENST00000384012 112 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 SNORD78.2-201ENST00000391076 69 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 SNORD12B-201ENST00000410433 91 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 PCNPP5-201ENST00000452246 481 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 NDUFB4P10-201ENST00000452541 359 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 TRBV12-1-201ENST00000479785 344 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 AC074133.1-201ENST00000515696 183 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 AC233702.2-202ENST00000562547 291 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 RPS29P30-201ENST00000600975 111 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 AC025754.2-201ENST00000606491 432 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 SNORD14A-201ENST00000606526 91 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 AC022202.1-201ENST00000613515 211 ntBASIC2.05□□□□□ -2.08
CLDN20P56880 Y_RNA.158-201ENST00000363651 101 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 SNORD87-201ENST00000364849 89 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 Y_RNA.326-201ENST00000365176 113 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 SNORD14.1-201ENST00000365609 90 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 Y_RNA.424-201ENST00000384063 103 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 RNU6-708P-201ENST00000384217 107 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 SNORD14D-201ENST00000384390 87 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 SDAD1P3-201ENST00000427380 333 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 UQCRBP2-201ENST00000447827 297 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 FCF1P4-201ENST00000448326 183 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.04□□□□□ -2.08
CLDN20P56880 RNU6-1012P-201ENST00000516606 109 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 AC087441.2-201ENST00000529141 262 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN20P56880 AL031274.2-201ENST00000599419 203 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms