Protein–RNA interactions for Protein: P56182

RRP1, Ribosomal RNA processing protein 1 homolog A, humanhuman

Known RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1P56182 RNU6-105P-201ENST00000363909 104 ntBASIC2.59□□□□□ -1.99
RRP1P56182 RNU1-91P-201ENST00000364746 163 ntBASIC2.59□□□□□ -1.99
RRP1P56182 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RRP1P56182 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RRP1P56182 AL591043.1-201ENST00000432461 424 ntBASIC2.59□□□□□ -1.99
RRP1P56182 Z82188.1-201ENST00000436709 154 ntBASIC2.59□□□□□ -1.99
RRP1P56182 AC096638.1-201ENST00000444678 216 ntBASIC2.59□□□□□ -1.99
RRP1P56182 LINC01399-202ENST00000458450 244 ntBASIC2.59□□□□□ -1.99
RRP1P56182 AC090515.1-201ENST00000465295 476 ntBASIC2.59□□□□□ -1.99
RRP1P56182 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.59□□□□□ -1.99
RRP1P56182 RPL30P10-201ENST00000488148 337 ntBASIC2.59□□□□□ -1.99
RRP1P56182 AC140059.1-201ENST00000489238 361 ntBASIC2.59□□□□□ -1.99
RRP1P56182 Y_RNA.673-201ENST00000516306 88 ntBASIC2.59□□□□□ -1.99
RRP1P56182 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.59□□□□□ -1.99
RRP1P56182 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.59□□□□□ -1.99
RRP1P56182 AC009127.3-201ENST00000570531 403 ntBASIC2.59□□□□□ -1.99
RRP1P56182 MIR3935-201ENST00000583472 104 ntBASIC2.59□□□□□ -1.99
RRP1P56182 AC073410.2-201ENST00000603240 332 ntBASIC2.59□□□□□ -1.99
RRP1P56182 SNRPGP19-201ENST00000603826 189 ntBASIC2.59□□□□□ -1.99
RRP1P56182 Y_RNA.783-201ENST00000613546 102 ntBASIC2.59□□□□□ -1.99
RRP1P56182 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.59□□□□□ -1.99
RRP1P56182 AL138825.1-201ENST00000618587 192 ntBASIC2.59□□□□□ -1.99
RRP1P56182 AC097372.5-201ENST00000623665 376 ntBASIC2.59□□□□□ -1.99
RRP1P56182 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.59□□□□□ -1.99
RRP1P56182 AC010615.1-201ENST00000594254 1764 ntBASIC2.59□□□□□ -2
RRP1P56182 Y_RNA.19-201ENST00000362462 99 ntBASIC2.58□□□□□ -2
RRP1P56182 RNU6-227P-201ENST00000362865 103 ntBASIC2.58□□□□□ -2
RRP1P56182 Y_RNA.123-201ENST00000363338 102 ntBASIC2.58□□□□□ -2
RRP1P56182 RNU6-770P-201ENST00000363929 105 ntBASIC2.58□□□□□ -2
RRP1P56182 Y_RNA.257-201ENST00000364596 102 ntBASIC2.58□□□□□ -2
RRP1P56182 RNA5SP125-201ENST00000364843 120 ntBASIC2.58□□□□□ -2
RRP1P56182 Y_RNA.405-201ENST00000383979 100 ntBASIC2.58□□□□□ -2
RRP1P56182 Y_RNA.451-201ENST00000384200 100 ntBASIC2.58□□□□□ -2
RRP1P56182 RNU1-57P-201ENST00000384491 166 ntBASIC2.58□□□□□ -2
RRP1P56182 Y_RNA.518-201ENST00000384552 113 ntBASIC2.58□□□□□ -2
RRP1P56182 Y_RNA.524-201ENST00000384564 100 ntBASIC2.58□□□□□ -2
RRP1P56182 Y_RNA.561-201ENST00000384694 100 ntBASIC2.58□□□□□ -2
RRP1P56182 AL079342.1-201ENST00000401460 267 ntBASIC2.58□□□□□ -2
RRP1P56182 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.58□□□□□ -2
RRP1P56182 RNU6-1132P-201ENST00000459214 107 ntBASIC2.58□□□□□ -2
RRP1P56182 AC091874.1-201ENST00000511402 339 ntBASIC2.58□□□□□ -2
RRP1P56182 RNY3P15-201ENST00000516297 97 ntBASIC2.58□□□□□ -2
RRP1P56182 AC109479.2-201ENST00000517842 174 ntBASIC2.58□□□□□ -2
RRP1P56182 AC034114.1-201ENST00000520293 285 ntBASIC2.58□□□□□ -2
RRP1P56182 MRPS36P4-201ENST00000534436 298 ntBASIC2.58□□□□□ -2
RRP1P56182 MIR3128-201ENST00000581957 66 ntBASIC2.58□□□□□ -2
RRP1P56182 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.58□□□□□ -2
RRP1P56182 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.58□□□□□ -2
RRP1P56182 AL353997.5-201ENST00000618886 171 ntBASIC2.58□□□□□ -2
RRP1P56182 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
RRP1P56182 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
RRP1P56182 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
RRP1P56182 Y_RNA.152-201ENST00000363578 100 ntBASIC2.57□□□□□ -2
RRP1P56182 Y_RNA.458-201ENST00000384240 102 ntBASIC2.57□□□□□ -2
RRP1P56182 Y_RNA.471-201ENST00000384312 102 ntBASIC2.57□□□□□ -2
RRP1P56182 Y_RNA.562-201ENST00000384695 113 ntBASIC2.57□□□□□ -2
RRP1P56182 MIR215-201ENST00000384858 110 ntBASIC2.57□□□□□ -2
RRP1P56182 MIR186-201ENST00000384988 86 ntBASIC2.57□□□□□ -2
RRP1P56182 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.57□□□□□ -2
RRP1P56182 SNORA69.1-201ENST00000390904 137 ntBASIC2.57□□□□□ -2
RRP1P56182 SNORA12.2-201ENST00000391040 156 ntBASIC2.57□□□□□ -2
RRP1P56182 CYCSP48-201ENST00000417124 323 ntBASIC2.57□□□□□ -2
RRP1P56182 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.57□□□□□ -2
RRP1P56182 Z98949.2-201ENST00000440996 144 ntBASIC2.57□□□□□ -2
RRP1P56182 AC007969.2-201ENST00000441891 191 ntBASIC2.57□□□□□ -2
RRP1P56182 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.57□□□□□ -2
RRP1P56182 AC025465.3-201ENST00000510570 311 ntBASIC2.57□□□□□ -2
RRP1P56182 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.57□□□□□ -2
RRP1P56182 RNU6-911P-201ENST00000516523 104 ntBASIC2.57□□□□□ -2
RRP1P56182 RNU6-570P-201ENST00000517051 105 ntBASIC2.57□□□□□ -2
RRP1P56182 AC144568.1-201ENST00000520139 137 ntBASIC2.57□□□□□ -2
RRP1P56182 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.57□□□□□ -2
RRP1P56182 AL590705.4-201ENST00000532209 134 ntBASIC2.57□□□□□ -2
RRP1P56182 MIR4448-201ENST00000584360 86 ntBASIC2.57□□□□□ -2
RRP1P56182 AC010928.2-201ENST00000588017 287 ntBASIC2.57□□□□□ -2
RRP1P56182 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.57□□□□□ -2
RRP1P56182 MIR5739-201ENST00000619803 80 ntBASIC2.57□□□□□ -2
RRP1P56182 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
RRP1P56182 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.56□□□□□ -2
RRP1P56182 Y_RNA.14-201ENST00000362415 103 ntBASIC2.56□□□□□ -2
RRP1P56182 RNU4-50P-201ENST00000364361 141 ntBASIC2.56□□□□□ -2
RRP1P56182 Y_RNA.288-201ENST00000364854 92 ntBASIC2.56□□□□□ -2
RRP1P56182 Y_RNA.350-201ENST00000365409 98 ntBASIC2.56□□□□□ -2
RRP1P56182 Y_RNA.358-201ENST00000365491 99 ntBASIC2.56□□□□□ -2
RRP1P56182 RNU6-713P-201ENST00000384761 107 ntBASIC2.56□□□□□ -2
RRP1P56182 RNU6-700P-201ENST00000391043 107 ntBASIC2.56□□□□□ -2
RRP1P56182 RNU2-2P-201ENST00000410396 191 ntBASIC2.56□□□□□ -2
RRP1P56182 RNA5SP247-201ENST00000411181 105 ntBASIC2.56□□□□□ -2
RRP1P56182 AC009310.1-201ENST00000414414 451 ntBASIC2.56□□□□□ -2
RRP1P56182 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.56□□□□□ -2
RRP1P56182 AC007098.1-201ENST00000420122 367 ntBASIC2.56□□□□□ -2
RRP1P56182 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.56□□□□□ -2
RRP1P56182 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.56□□□□□ -2
RRP1P56182 RPL30P12-201ENST00000474666 353 ntBASIC2.56□□□□□ -2
RRP1P56182 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.56□□□□□ -2
RRP1P56182 RNA5SP458-201ENST00000516188 119 ntBASIC2.56□□□□□ -2
RRP1P56182 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.56□□□□□ -2
RRP1P56182 AC121758.2-201ENST00000553271 193 ntBASIC2.56□□□□□ -2
RRP1P56182 AL390123.1-201ENST00000603216 237 ntBASIC2.56□□□□□ -2
RRP1P56182 AL138963.2-201ENST00000605137 226 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms